@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1417: (2015-12-07 )
MIYTVTLNPSIDFIVRLDTLLLGSVNRMTSDDKYVGGKGINVSRILKRLKIDNTATGFIGGFTGHFVEDGLVSEGIKTDFVSVNEDTRINVKVKAKIETEINGGGPRITNEQLHRLEKLLSRLTPEDTVVFAGSAPASLGNKVYNTLIPIAKKTGAEVVCDFEGQTLLDALAYQPLLVKPNNHELADIFGVELEGLPDIEKYAHKILDKGAKNVIVSMAGDGALLVTPEASYFAKPIKGEVKNSVGAGDSMVAGFTGEFVKSKNPVEALKWGVACGTATTFSDDLATAEFIQDIYNKVEVEKL

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

F6P_A_5(3N1C)
PFKB_ECOLI
[Raw transfer]



FBP_B_9(3UQD)
PFKB_ECOLI
[Raw transfer]



F6P_D_18(3UQD)
PFKB_ECOLI
[Raw transfer]



F6P_B_6(3N1C)
PFKB_ECOLI
[Raw transfer]



F6P_C_7(3N1C)
PFKB_ECOLI
[Raw transfer]



F6P_D_8(3N1C)
PFKB_ECOLI
[Raw transfer]



FBP_C_14(3UQD)
PFKB_ECOLI
[Raw transfer]



F6P_A_6(3UQD)
PFKB_ECOLI
[Raw transfer]
2 PsiBlast_PDB 96.3443% -82 - C2 -2ABQ - ? -
1 PsiBlast_PDB 96.0844% -90 - C2 -2JG5 - ? -
78 HHSearch 95.8144% -81 - C2 -2ABQ - ? -
73 HHSearch 94.7944% -89 - C2 -2JG5 - ? -
76 HHSearch 87.8532% -75 * C2 *2F02 - LACC_ENTFA -
5 PsiBlast_PDB 87.5032% -81 - C2 -2JGV - LACC_STAA8 -
28 PsiBlast_CBE 85.8931% -79 - C2 -3N1C 3.8 PFKB_ECOLI
7 PsiBlast_PDB 85.7231% -74 - C2 -2JG1 - LACC_STAA8 -
74 HHSearch 85.6532% -74 - C2 -2JG1 - LACC_STAA8 -
10 PsiBlast_PDB 85.5731% -79 - C2 -3N1C 4.0 PFKB_ECOLI
30 PsiBlast_CBE 85.4931% -77 - C2 -3UQE - PFKB_ECOLI -
6 PsiBlast_PDB 85.3832% -74 - C2 -2Q5R - LACC_STAAC -
24 PsiBlast_CBE 85.3031% -74 - C2 -3UMP - PFKB_ECOLI -
14 PsiBlast_PDB 85.2331% -73 - C2 -3UQE - PFKB_ECOLI -
22 PsiBlast_CBE 85.1631% -78 - C2 -3UQD 4.7 PFKB_ECOLI
13 PsiBlast_PDB 84.7131% -79 - C2 -3UQD 4.0 PFKB_ECOLI
26 PsiBlast_CBE 84.4331% -77 - C2 -3N1C 4.9 PFKB_ECOLI
29 PsiBlast_CBE 84.1531% -74 - C2 -3CQD - PFKB_ECOLI -
27 PsiBlast_CBE 84.0431% -77 - C2 -3N1C 4.2 PFKB_ECOLI
11 PsiBlast_PDB 83.9831% -77 - C2 -3UMO - PFKB_ECOLI -
23 PsiBlast_CBE 83.8731% -78 - C2 -3UQD 5.2 PFKB_ECOLI
21 PsiBlast_CBE 83.7731% -76 - C2 -3UQD 4.0 PFKB_ECOLI