@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1449: (2015-12-08 )
MKIVVPVMPRSLEEAQEIDLSKFDSVDIIEWRADALPKDDIINVAPAIFEKFAGHEIIFTLRTTREGGNIVLSDAEYVELIQKINSIYNPDYIDFEYFSHKEVFQEMLEFPNLVLSYHNFQETPENIMEIFSELTALAPRVVKIAVMPKNEQDVLDVMNYTRGFKTINPDQVYATVSMSKIGRISRFAGDVTGSSWTFAYLDSSIAPGQITISEMKRVKALLDAD

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CIT_A_3(3LB0)
AROD_SALTY
[Raw transfer]




SKM_A_3(4GUJ)
AROD_SALTY
[Raw transfer]




QIC_A_3(4GUI)
AROD_SALTY
[Raw transfer]




DQA_A_3(3NNT)
AROD_SALTY
[Raw transfer]




QIC_A_3(4IUO)
AROD_SALTY
[Raw transfer]




DHS_E_5(1L9W)
AROD_SALTI
[Raw transfer]




GOL_A_5(2OX1)
AROD_ARCFU
[Raw transfer]




3DS_A_4(4GUG)
AROD_SALTY
[Raw transfer]




DHS_A_3(1QFE)
AROD_SALTI
[Raw transfer]




3DS_A_3(4GUH)
AROD_SALTY
[Raw transfer]




DHS_C_7(3JS3)
AROD_PEPD6
[Raw transfer]




DHK_A_3(2O7S)
DHQSD_ARATH
[Raw transfer]




DHS_A_3(1QFE)
AROD_SALTI
[Raw transfer]




DHS_A_5(3JS3)
AROD_PEPD6
[Raw transfer]




DHS_B_6(3JS3)
AROD_PEPD6
[Raw transfer]




DHS_D_8(3JS3)
AROD_PEPD6
[Raw transfer]




SHL_B_9(4H3D)
AROD_PEPD6
[Raw transfer]




SHL_A_7(4H3D)
AROD_PEPD6
[Raw transfer]




SHL_D_13(4H3D)
AROD_PEPD6
[Raw transfer]




SHL_C_12(4H3D)
AROD_PEPD6
[Raw transfer]




EDO_A_5(2OCZ)
AROD_STRP1
[Raw transfer]




EDO_A_5(2OCZ)
AROD_STRP1
[Raw transfer]




PEG_A_6(4H3D)
AROD_PEPD6
[Raw transfer]




1 PsiBlast_PDB 97.3969%-125 - C4 -3L9C - AROD_STRMU -
33 HHSearch 97.2469%-124 - C4 -3L9C - AROD_STRMU -
2 PsiBlast_PDB 96.5067%-118 - C4 -2OCZ 2.4 AROD_STRP1
32 HHSearch 93.7767%-113 - C4 -2OCZ 2.4 AROD_STRP1
53 Fugue 77.0630%-101 - C4 -1QFE 3.4 AROD_SALTI
20 PsiBlast_PDB 75.4729% -99 - C4 -1L9W 4.2 AROD_SALTI
19 PsiBlast_PDB 75.3429%-101 - C4 -1QFE 3.4 AROD_SALTI
8 PsiBlast_PDB 75.3030% -95 - C4 -3M7W - AROD_SALTY -
15 PsiBlast_PDB 75.1630%-100 - C4 -4GUH 3.5 AROD_SALTY
13 PsiBlast_PDB 74.9530%-106 - C4 -4GUF - AROD_SALTY -
25 PsiBlast_CBE 74.9135% -97 - C4 -3JS3 3.6 AROD_PEPD6
18 PsiBlast_PDB 74.7530%-100 - C4 -4IUO 4.3 AROD_SALTY
16 PsiBlast_PDB 74.6830% -99 - C4 -3O1N - AROD_SALTY -
14 PsiBlast_PDB 74.6330%-104 - C4 -4GUG 2.7 AROD_SALTY
17 PsiBlast_PDB 74.5530%-101 - C4 -3NNT 4.1 AROD_SALTY
11 PsiBlast_PDB 74.5330% -98 - C4 -4GUI 4.1 AROD_SALTY
12 PsiBlast_PDB 74.5230% -97 - C4 -4GUJ 4.6 AROD_SALTY
6 PsiBlast_PDB 74.5230% -99 - C4 -3LB0 3.3 AROD_SALTY
9 PsiBlast_PDB 74.2530% -97 - C4 -3OEX - AROD_SALTY -
3 PsiBlast_PDB 74.1835% -97 - C4 -3JS3 3.8 AROD_PEPD6
24 PsiBlast_CBE 74.1735% -93 - C4 -3JS3 3.0 AROD_PEPD6
23 PsiBlast_CBE 73.9635% -99 - C4 -4H3D 2.8 AROD_PEPD6
21 PsiBlast_CBE 73.1635% -99 - C4 -4H3D 3.0 AROD_PEPD6
22 PsiBlast_CBE 72.5935%-102 - C4 -4H3D 3.2 AROD_PEPD6
26 PsiBlast_CBE 72.4635% -98 - C4 -3JS3 3.2 AROD_PEPD6
4 PsiBlast_PDB 70.9735%-102 - C4 -4H3D 2.8 AROD_PEPD6