@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1507: (2015-12-08 )
MTRNFTTYVEQQGKVLSELTNEEIYVELLNFVKEEAAAKSKNSSQRKVYYISAEFLIGKLLSNNLINLGIYKDVKKELELVGKSIAEIEDVEPEPSLGNGGLGRLASCFIDSISSLGINGEGVGLNYHCGLFKQVFRNNQQEAEANYWIENNSWLVPTDISYDVPFRDFTLKSRLDRIDVLGYKKDTKNYLNLFDIDGLDYNLIEKGITFDKTEIKKNLTLFLYPDDSDKNGELLRIYQQYFMVSNAAQLLIDEAIERGSNLHDLAEYAYVQINDTHPSMVIPELIRLLTEKHGFEFDEAVSVVRNMVGYTNHTILAEALEKWPLEYLNEVVPHLVTIIKKLDQMIREEQTNPEVQIIDEAGRVHMAHMDIHFSTSVNGVAALHTEILKNSELKVFYDIYPDKFNNKTNGITFRRWLEFANQDLADYLKELIGDSYLTDATQLEKLLTYADSNEVHDKLAAIKFKNKLALKRYLKENKGIELDEYSIIDTQIKRFHEYKRQQMNALYVIHKYLEIKRGHFPSRKLTVIFGGKAAPAYTIAQDIIHLILCLSELINNDPEVNKYLNVHLVENYNVTVAEKLIPATDISEQISLASKEASGTGNMKFMLNGALTLGTMDGANVEIAELAGKENIYTFGKDSDTIINLYETSGYRSKDYYDKDKVIREAVDFIISDDIVSLGNAERLKRLHDELVGKDWFMTLIDLKEYIAVKEQVLADYEDYESWNKKVIHNIAKAGFFSSDRTIEQYNQDIWHSN

Atome Classification :

(52 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

8GP_E_5(2F3U)
PYGM_RABIT
[Raw transfer]




7GP_E_5(2F3S)
PYGM_RABIT
[Raw transfer]




IMK_D_4(1XKX)
PYGM_RABIT
[Raw transfer]




6GP_E_5(2F3Q)
PYGM_RABIT
[Raw transfer]




C3B_A_3(3BD8)
PYGM_RABIT
[Raw transfer]




CKB_A_4(3BD7)
PYGM_RABIT
[Raw transfer]




4GP_E_5(2F3P)
PYGM_RABIT
[Raw transfer]




C4B_A_4(3BDA)
PYGM_RABIT
[Raw transfer]




H53_E_5(2FET)
PYGM_RABIT
[Raw transfer]




G1P_C_3(3GPB)
PYGM_RABIT
[Raw transfer]




M8P_A_4(4CTN)
PYGM_RABIT
[Raw transfer]




M7C_A_2(4CTO)
PYGM_RABIT
[Raw transfer]




OX2_B_2(1XL0)
PYGM_RABIT
[Raw transfer]




T68_A_2(3ZCU)
PYGM_RABIT
[Raw transfer]




HBZ_A_3(2QN7)
PYGM_RABIT
[Raw transfer]




62N_A_3(3ZCQ)
PYGM_RABIT
[Raw transfer]




VMP_A_5(3ZCT)
PYGM_RABIT
[Raw transfer]




MIF_A_2(4CTM)
PYGM_RABIT
[Raw transfer]




TH1_B_2(1XL1)
PYGM_RABIT
[Raw transfer]




GL6_C_3(1XC7)
PYGM_RABIT
[Raw transfer]




DL6_E_5(2FFR)
PYGM_RABIT
[Raw transfer]




NBX_A_3(2QN9)
PYGM_RABIT
[Raw transfer]




CAW_A_4(3ZCS)
PYGM_RABIT
[Raw transfer]




N85_A_3(3ZCV)
PYGM_RABIT
[Raw transfer]




H53_E_5(2FF5)
PYGM_RABIT
[Raw transfer]




H2P_C_3(6GPB)
PYGM_RABIT
[Raw transfer]




GLC_C_3(2GPA)
PYGM_RABIT
[Raw transfer]




GPM_C_3(5GPB)
PYGM_RABIT
[Raw transfer]




GLC_C_3(1LWN)
PYGM_RABIT
[Raw transfer]




F85_A_4(3ZCR)
PYGM_RABIT
[Raw transfer]




F58_A_3(3ZCP)
PYGM_RABIT
[Raw transfer]




GFP_C_3(4GPB)
PYGM_RABIT
[Raw transfer]




GOL_A_4(2AMV)
PYGM_RABIT
[Raw transfer]




GOL_A_5(1C8L)
PYGM_RABIT
[Raw transfer]




HTP_I_9(1AXR)
PYGM_RABIT
[Raw transfer]




PLR_A_2(2GM9)
PYGM_RABIT
[Raw transfer]




PLR_A_10(2GJ4)
PYGM_RABIT
[Raw transfer]




PLP_A_3(3AMV)
PYGM_RABIT
[Raw transfer]




PLP_A_5(1LWN)
PYGM_RABIT
[Raw transfer]




PLP_A_2(1C8L)
PYGM_RABIT
[Raw transfer]




PLP_A_6(2GPA)
PYGM_RABIT
[Raw transfer]




PLP_C_3(8GPB)
PYGM_RABIT
[Raw transfer]




PLP_A_3(1Z62)
PYGM_RABIT
[Raw transfer]




PLP_A_5(1E1Y)
PYGM_RABIT
[Raw transfer]




PLP_A_3(1LWO)
PYGM_RABIT
[Raw transfer]




PLP_A_2(4YUA)
PYGM_RABIT
[Raw transfer]




PLP_A_2(2AMV)
PYGM_RABIT
[Raw transfer]




PLP_A_5(2PRI)
PYGM_RABIT
[Raw transfer]




PLP_E_5(1GPY)
PYGM_RABIT
[Raw transfer]




PLP_A_3(1XL0)
PYGM_RABIT
[Raw transfer]




PLP_A_5(2PRJ)
PYGM_RABIT
[Raw transfer]




PLP_A_2(1UZU)
PYGM_RABIT
[Raw transfer]




PLP_G_7(1AXR)
PYGM_RABIT
[Raw transfer]




PLP_A_7(2SKD)
PYGM_RABIT
[Raw transfer]




PLP_A_7(2SKE)
PYGM_RABIT
[Raw transfer]




PLP_A_5(2SKC)
PYGM_RABIT
[Raw transfer]




1 PsiBlast_PDB 99.0381% -85 - C5 -4L22 - ? -
96 PsiBlast_CBE 82.9336% -75 - C5 -2QN9 6.2 PYGM_RABIT
71 PsiBlast_CBE 82.9137% -76 - C5 -3ZCR 7.8 PYGM_RABIT
51 PsiBlast_CBE 82.7337% -74 - C5 -1Z62 3.6 PYGM_RABIT
97 PsiBlast_CBE 82.6236% -75 - C5 -2QN7 6.4 PYGM_RABIT
73 PsiBlast_CBE 82.5937% -74 - C5 -2GJ4 3.8 PYGM_RABIT
16 PsiBlast_PDB 82.4837% -72 - C5 -1LWN 3.8 PYGM_RABIT
69 PsiBlast_CBE 82.4637% -74 - C5 -3ZCU 5.9 PYGM_RABIT
68 PsiBlast_CBE 82.3937% -75 - C5 -3ZCV 6.8 PYGM_RABIT
74 PsiBlast_CBE 82.3637% -74 - C5 -2GM9 3.6 PYGM_RABIT
45 PsiBlast_CBE 82.3637% -73 - C5 -2FET 5.5 PYGM_RABIT
67 PsiBlast_CBE 82.3437% -74 - C5 -4CTM 4.4 PYGM_RABIT
19 PsiBlast_PDB 82.3337% -73 - C5 -2GPA 3.7 PYGM_RABIT
17 PsiBlast_PDB 82.3037% -71 - C5 -1LWO 3.8 PYGM_RABIT
72 PsiBlast_CBE 82.2937% -74 - C5 -3ZCQ 7.1 PYGM_RABIT
57 PsiBlast_CBE 82.2837% -78 - C5 -1PYG - PYGM_RABIT -
75 PsiBlast_CBE 82.1136% -76 - C5 -3ZCS 6.6 PYGM_RABIT
54 PsiBlast_CBE 82.1037% -73 - C5 -1XKX 6.1 PYGM_RABIT
20 PsiBlast_PDB 82.0637% -75 - C5 -3ZCP 6.0 PYGM_RABIT
64 PsiBlast_CBE 82.0337% -74 - C5 -4YUA 3.7 PYGM_RABIT
15 PsiBlast_PDB 82.0337% -72 - C5 -1C8L 2.7 PYGM_RABIT
70 PsiBlast_CBE 81.9637% -75 - C5 -3ZCT 6.8 PYGM_RABIT
53 PsiBlast_CBE 81.9437% -73 - C5 -1XL0 5.0 PYGM_RABIT
44 PsiBlast_CBE 81.9137% -73 - C5 -2FF5 5.3 PYGM_RABIT
14 PsiBlast_PDB 81.9137% -71 - C5 -2FFR 4.5 PYGM_RABIT
66 PsiBlast_CBE 81.9037% -73 - C5 -4CTN 8.0 PYGM_RABIT
65 PsiBlast_CBE 81.8937% -74 - C5 -4CTO 6.5 PYGM_RABIT
46 PsiBlast_CBE 81.7737% -73 - C5 -2F3U 5.2 PYGM_RABIT
52 PsiBlast_CBE 81.7637% -72 - C5 -1XL1 6.1 PYGM_RABIT
56 PsiBlast_CBE 81.7237% -74 - C5 -1UZU 3.2 PYGM_RABIT
18 PsiBlast_PDB 81.7137% -72 - C5 -3AMV 3.3 PYGM_RABIT
55 PsiBlast_CBE 81.6737% -72 - C5 -1XC7 5.0 PYGM_RABIT
42 PsiBlast_CBE 81.6637% -73 - C5 -3BD8 5.7 PYGM_RABIT
48 PsiBlast_CBE 81.5937% -73 - C5 -2F3Q 5.3 PYGM_RABIT
41 PsiBlast_CBE 81.5937% -74 - C5 -3BDA 6.1 PYGM_RABIT
49 PsiBlast_CBE 81.5737% -72 - C5 -2F3P 4.6 PYGM_RABIT
43 PsiBlast_CBE 81.5437% -72 - C5 -3BD7 6.5 PYGM_RABIT
84 PsiBlast_CBE 81.4336% -72 - C5 -8GPB 3.3 PYGM_RABIT
92 PsiBlast_CBE 81.4136% -73 - C5 -3GPB 4.2 PYGM_RABIT
50 PsiBlast_CBE 81.3937% -73 - C5 -2AMV 3.5 PYGM_RABIT
47 PsiBlast_CBE 81.3037% -73 - C5 -2F3S 5.5 PYGM_RABIT
62 PsiBlast_CBE 80.9637% -73 - C5 -1E1Y 3.4 PYGM_RABIT
90 PsiBlast_CBE 80.9136% -71 - C5 -5GPB 3.9 PYGM_RABIT
99 PsiBlast_CBE 80.8436% -70 - C5 -2PRI 3.8 PYGM_RABIT
63 PsiBlast_CBE 80.7837% -72 - C5 -1AXR 4.1 PYGM_RABIT
93 PsiBlast_CBE 80.5136% -71 - C5 -2SKE 3.0 PYGM_RABIT
91 PsiBlast_CBE 80.4936% -72 - C5 -4GPB 4.4 PYGM_RABIT
89 PsiBlast_CBE 80.4736% -71 - C5 -6GPB 4.2 PYGM_RABIT
95 PsiBlast_CBE 80.2536% -71 - C5 -2SKC 3.0 PYGM_RABIT
98 PsiBlast_CBE 80.0536% -70 - C5 -2PRJ 3.9 PYGM_RABIT
61 PsiBlast_CBE 80.0237% -71 - C5 -1GPY 3.2 PYGM_RABIT
94 PsiBlast_CBE 79.6436% -70 - C5 -2SKD 2.9 PYGM_RABIT