@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1591: (2015-12-09 )
MKIGIIAAMEEELKLLVENLEDKSQETVLSNVYYSGRYGEHELVLVQSGVGKVMSAMSVAILVESFKVDAIINTGSAGAVATGLNVGDVVVADTLVYHDVDLTAFGYDYGQMSMQPLYFHSDKTFVSTFEAVLSKEEMTSKVGLIATGDSFIAGQEKIDVIKGHFPQVLAVEMEGAAIAQAAQATGKPFVVVRAMSDTAAHDANITFDEFIIEAGKRSAQVLMAFLKAL

Atome Classification :

(67 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MTA_B_3(4G41)
?
[Raw transfer]




FMC_C_3(1NC3)
MTNN_ECOLI
[Raw transfer]




MTM_D_4(1Y6R)
MTNN_ECOLI
[Raw transfer]




MTA_D_4(1Z5O)
MTNN_ECOLI
[Raw transfer]




FMC_A_2(3BL6)
MTNN_STAAM
[Raw transfer]




FMC_A_2(3BL6)
MTNN_STAAM
[Raw transfer]




MTM_A_3(3EEI)
?
[Raw transfer]




FMC_B_4(3NM5)
MQMTN_HELPJ
[Raw transfer]




FMC_A_3(3NM5)
MQMTN_HELPJ
[Raw transfer]




MTA_B_4(4BMZ)
MQMTN_HELPY
[Raw transfer]




MTA_C_3(1Z5O)
MTNN_ECOLI
[Raw transfer]




MTM_B_4(3EEI)
?
[Raw transfer]




MTA_A_3(4BMZ)
MQMTN_HELPY
[Raw transfer]




FMC_D_4(1NC3)
MTNN_ECOLI
[Raw transfer]




MTM_C_3(1Y6R)
MTNN_ECOLI
[Raw transfer]




MTA_A_2(4P54)
MQMTN_HELPJ
[Raw transfer]




MTH_C_3(1NC1)
MTNN_ECOLI
[Raw transfer]




MTM_A_3(3EEI)
?
[Raw transfer]




MTH_D_4(1NC1)
MTNN_ECOLI
[Raw transfer]




SAH_A_2(4OY3)
MQMTN_HELPJ
[Raw transfer]




2EL_B_7(4F2P)
?
[Raw transfer]




TDI_A_5(1Y6Q)
MTNN_ECOLI
[Raw transfer]




TDI_B_8(4F2W)
?
[Raw transfer]




TDI_A_3(4F2W)
?
[Raw transfer]




2EL_A_3(4F2P)
?
[Raw transfer]




TDI_B_4(4WKB)
?
[Raw transfer]




TDI_B_6(1Y6Q)
MTNN_ECOLI
[Raw transfer]




BIG_B_5(4F3C)
?
[Raw transfer]




BIG_A_3(4F3C)
?
[Raw transfer]




BIG_A_2(4WKC)
?
[Raw transfer]




TDI_B_5(4X24)
?
[Raw transfer]




HCE_A_3(4F3K)
?
[Raw transfer]




BIG_C_5(3DP9)
MTNN_VIBCH
[Raw transfer]




4CT_B_6(3O4V)
MTNN_ECOLI
[Raw transfer]




HCE_B_5(4F3K)
?
[Raw transfer]




DF9_B_4(3DF9)
MTNN_ECO57
[Raw transfer]




DF9_A_3(3DF9)
MTNN_ECO57
[Raw transfer]




4CT_A_3(3O4V)
MTNN_ECOLI
[Raw transfer]




Q88_A_2(3MMS)
?
[Raw transfer]




BIG_A_2(4FFS)
MQMTN_HELPJ
[Raw transfer]




4F0_A_2(4YML)
?
[Raw transfer]




SAH_A_4(4G89)
MTNN_KLEP7
[Raw transfer]




GOL_A_4(1Z5P)
MTNN_ECOLI
[Raw transfer]




ADE_B_2(3NM6)
MQMTN_HELPJ
[Raw transfer]




ADE_B_4(4BMX)
MQMTN_HELPY
[Raw transfer]




ADE_B_4(4QEZ)
MTNN_BACAN
[Raw transfer]




ADE_A_6(4QEZ)
MTNN_BACAN
[Raw transfer]




SR1_C_3(1Z5N)
MTNN_ECOLI
[Raw transfer]




2WP_A_2(4OJT)
MQMTN_HELPJ
[Raw transfer]




ADE_C_9(4QEZ)
MTNN_BACAN
[Raw transfer]




ADE_D_4(1JYS)
MTNN_ECOLI
[Raw transfer]




SR1_E_5(1Z5N)
MTNN_ECOLI
[Raw transfer]




ADE_C_3(1JYS)
MTNN_ECOLI
[Raw transfer]




TRS_A_3(3NM4)
MQMTN_HELPJ
[Raw transfer]




EDO_B_6(3NM4)
MQMTN_HELPJ
[Raw transfer]




EDO_A_11(4F1W)
?
[Raw transfer]




PGE_B_15(4F1W)
?
[Raw transfer]




PG4_A_5(4F1W)
?
[Raw transfer]




PE5_A_3(1Z5P)
MTNN_ECOLI
[Raw transfer]




2 PsiBlast_PDB 96.5373%-126 - C1 -4G41 - ? -
26 PsiBlast_CBE 95.5773%-120 - C1 -4G41 6.8 ?
22 PsiBlast_CBE 93.4967%-117 - C1 -1ZOS - ? -
25 PsiBlast_CBE 93.3167%-115 - C1 -1ZOS - ? -
21 PsiBlast_CBE 93.1067%-116 - C1 -1ZOS - ? -
24 PsiBlast_CBE 92.8167%-115 - C1 -1ZOS - ? -
71 HHSearch 92.7968%-115 - C1 -1ZOS - ? -
94 Fugue 92.5067%-116 - C1 -1ZOS - ? -
1 PsiBlast_PDB 92.4767%-115 - C1 -1ZOS - ? -
23 PsiBlast_CBE 92.4167%-115 - C1 -1ZOS - ? -
3 PsiBlast_PDB 91.2468%-118 - C1 -3MMS 4.2 ?
50 PsiBlast_CBE 83.7142%-114 - C1 -1Z5O 6.6 MTNN_ECOLI
20 PsiBlast_PDB 83.6843%-115 - C1 -1NC3 6.1 MTNN_ECOLI
18 PsiBlast_PDB 83.4243%-113 - C1 -4YML 6.3 ?
72 HHSearch 83.2846%-108 - C1 -3BL6 6.1 MTNN_STAAM
4 PsiBlast_PDB 83.2846%-108 - C1 -3BL6 6.1 MTNN_STAAM
46 PsiBlast_CBE 83.0343%-112 - C1 -1NC1 6.1 MTNN_ECOLI
5 PsiBlast_PDB 82.9246%-117 - C1 -4GMH - MTNN_STAAM -
17 PsiBlast_PDB 82.9143%-111 - C1 -4WKC 6.6 ?
40 PsiBlast_CBE 82.7743%-113 - C1 -1Y6R 6.2 MTNN_ECOLI
49 PsiBlast_CBE 82.6742%-113 - C1 -1Z5N 3.6 MTNN_ECOLI
41 PsiBlast_CBE 82.6043%-111 - C1 -1Y6R 6.2 MTNN_ECOLI
45 PsiBlast_CBE 82.5643%-114 - C1 -1NC1 6.2 MTNN_ECOLI
42 PsiBlast_CBE 82.5643%-110 - C1 -1Y6Q 6.2 MTNN_ECOLI
39 PsiBlast_CBE 82.4243%-119 - C1 -1Z5P 2.5 MTNN_ECOLI
43 PsiBlast_CBE 82.3243%-112 - C1 -1Y6Q 6.3 MTNN_ECOLI
38 PsiBlast_CBE 82.2643%-111 - C1 -3DF9 7.3 MTNN_ECO57
36 PsiBlast_CBE 82.1543%-111 - C1 -3O4V 7.3 MTNN_ECOLI
44 PsiBlast_CBE 81.9643%-113 - C1 -1NC3 6.1 MTNN_ECOLI
51 PsiBlast_CBE 81.8742%-113 - C1 -1Z5O 6.4 MTNN_ECOLI
47 PsiBlast_CBE 81.8643%-116 - C1 -1JYS 3.8 MTNN_ECOLI
37 PsiBlast_CBE 81.7843%-113 - C1 -3DF9 6.8 MTNN_ECO57
48 PsiBlast_CBE 81.4142%-114 - C1 -1Z5N 3.3 MTNN_ECOLI
32 PsiBlast_CBE 81.3842%-111 - C1 -4F3C 6.5 ?
16 PsiBlast_PDB 81.0943%-110 - C1 -3O4V 7.3 MTNN_ECOLI
14 PsiBlast_PDB 80.6542%-112 - C1 -4F3C 6.6 ?
31 PsiBlast_CBE 80.5742%-109 - C1 -4F3K 5.8 ?
34 PsiBlast_CBE 80.4242%-109 - C1 -4F2P 6.6 ?
35 PsiBlast_CBE 80.3642%-111 - C1 -4F1W 1.9 ?
33 PsiBlast_CBE 80.3442%-113 - C1 -4F2W 6.4 ?
27 PsiBlast_CBE 80.1343%-110 - C1 -3DP9 6.2 MTNN_VIBCH
12 PsiBlast_PDB 79.8142%-111 - C1 -4F2P 6.3 ?
19 PsiBlast_PDB 79.7743%-116 - C1 -1JYS 3.6 MTNN_ECOLI
13 PsiBlast_PDB 79.6742%-111 - C1 -4F2W 6.5 ?
11 PsiBlast_PDB 79.6142%-118 - C1 -4F1W 3.0 ?
15 PsiBlast_PDB 79.2442%-110 - C1 -4F3K 6.0 ?
73 HHSearch 79.0541%-107 * C1 *3EEI 6.0 ?
29 PsiBlast_CBE 78.7343%-108 - C1 -4X24 6.0 ?
28 PsiBlast_CBE 78.5943%-105 - C1 -4WKB 6.2 ?
56 PsiBlast_CBE 75.9741%-104 - C1 -3EEI 6.0 ?
55 PsiBlast_CBE 75.9041%-107 - C1 -3EEI 6.2 ?
52 PsiBlast_CBE 74.9742%-104 - C1 -4QEZ 3.6 MTNN_BACAN
54 PsiBlast_CBE 74.4942%-104 - C1 -4QEZ 4.6 MTNN_BACAN
53 PsiBlast_CBE 74.1442%-102 - C1 -4QEZ 3.5 MTNN_BACAN
68 PsiBlast_CBE 72.0232%-108 - C1 -4FFS 6.8 MQMTN_HELPJ
69 PsiBlast_CBE 71.2432%-111 - C1 -4P54 6.8 MQMTN_HELPJ
10 PsiBlast_PDB 71.1644% -96 - C1 -4G89 3.4 MTNN_KLEP7
70 PsiBlast_CBE 70.9732%-109 - C1 -4OY3 7.2 MQMTN_HELPJ
65 PsiBlast_CBE 70.6832%-108 - C1 -3NM5 5.8 MQMTN_HELPJ
62 PsiBlast_CBE 70.5332%-108 - C1 -4OJT 3.4 MQMTN_HELPJ
67 PsiBlast_CBE 70.5132%-107 - C1 -3NM4 2.3 MQMTN_HELPJ
63 PsiBlast_CBE 70.2232%-106 - C1 -3NM6 4.0 MQMTN_HELPJ
66 PsiBlast_CBE 69.9632%-114 - C1 -3NM4 3.5 MQMTN_HELPJ
64 PsiBlast_CBE 69.8132%-105 - C1 -3NM5 5.8 MQMTN_HELPJ
57 PsiBlast_CBE 69.1133%-109 - C1 -4BMX 4.1 MQMTN_HELPY
60 PsiBlast_CBE 68.3133%-110 - C1 -4BMZ 6.4 MQMTN_HELPY
59 PsiBlast_CBE 67.9033%-109 - C1 -4BMZ 6.4 MQMTN_HELPY