@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1594: (2015-12-09 )
MSNYAIILAAGKGTRMKSDLPKVMHKVSGITMLEHVFRSVQAIEPSKIVTVIGHKAELVRDVLGDKSEFVMQTEQLGTGHAVMMAEEELATSKGHTLVIAGDTPLITGESLKNLIGFHVNHKNVATILTADAANPFGYGRIIRNSDDEVTKIVEQKDANDFEQQVKEINTGTYVFDNQSLFEALKDINTNNAQGEYYLTDVIGIFKEAGKKVGAYKLRDFDESLGVNDRVALATAEKVMRHRIARQHMVNGVTVVNPDSAYIDIDVEIGEESVIEPNVTLKGQTKIGKGTLLTNGSYLVDAQVGNDVTITNSMVEESIISDGVTVGPYAHIRPGTSLAKGVHIGNFVEVKGSQIGENTKAGHLTYIGNAEVGCDVNFGAGTITVNYDGQNKFKTEIGSNVFIGSNSTLIAPLEIGDNALTAAGSTITDNVPIDSIAIGRGRQVNKEGYANKKPHHPSQK

Atome Classification :

(50 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UD1_A_2(3D8V)
GLMU_MYCTU
[Raw transfer]




UD1_B_14(2OI6)
GLMU_ECOLI
[Raw transfer]




UD1_A_4(1G97)
GLMU_STRPN
[Raw transfer]




UD1_A_7(4G3P)
?
[Raw transfer]




UD1_B_14(2OI5)
GLMU_ECOLI
[Raw transfer]




UD1_A_4(1G97)
GLMU_STRPN
[Raw transfer]




UD1_A_4(3DJ4)
GLMU_MYCTU
[Raw transfer]




UD1_B_11(1HV9)
GLMU_ECOLI
[Raw transfer]




UD1_A_13(1HM9)
GLMU_STRPN
[Raw transfer]




UD1_A_13(1HM9)
GLMU_STRPN
[Raw transfer]




UD1_B_13(2OI7)
GLMU_ECOLI
[Raw transfer]




UD1_A_13(1HM9)
GLMU_STRPN
[Raw transfer]




UD1_B_14(1HM9)
GLMU_STRPN
[Raw transfer]




UD1_A_7(4G3Q)
GLMU_MYCTU
[Raw transfer]




UD1_A_6(4G87)
GLMU_MYCTU
[Raw transfer]




UD1_A_2(4G3S)
GLMU_MYCTU
[Raw transfer]




1SG_A_12(4KQL)
GLMU_HAEIN
[Raw transfer]




UD1_V_22(1FWY)
GLMU_ECOLI
[Raw transfer]




UD1_A_12(2OI7)
GLMU_ECOLI
[Raw transfer]




UD1_A_13(2OI6)
GLMU_ECOLI
[Raw transfer]




UD1_A_6(3SPT)
GLMU_MYCTU
[Raw transfer]




1SE_A_12(4KPX)
GLMU_HAEIN
[Raw transfer]




UD1_A_8(3ST8)
GLMU_MYCTU
[Raw transfer]




UD1_A_13(2OI5)
GLMU_ECOLI
[Raw transfer]




UD1_A_10(1HV9)
GLMU_ECOLI
[Raw transfer]




UD1_A_2(2V0I)
GLMU_HAEIN
[Raw transfer]




UD1_S_19(1FWY)
GLMU_ECOLI
[Raw transfer]




UD1_A_10(1HV9)
GLMU_ECOLI
[Raw transfer]




1S8_A_2(4KNR)
GLMU_HAEIN
[Raw transfer]




ATP_A_2(4K6R)
GLMU_MYCTO
[Raw transfer]




0N5_A_6(4E1K)
GLMU_HAEIN
[Raw transfer]




1S9_A_2(4KNX)
GLMU_HAEIN
[Raw transfer]




URI_A_2(2V0L)
GLMU_HAEIN
[Raw transfer]




1SF_A_2(4KPZ)
GLMU_HAEIN
[Raw transfer]




LZR_A_2(2W0V)
GLMU_HAEIN
[Raw transfer]




LZS_A_2(2W0W)
GLMU_HAEIN
[Raw transfer]




UDP_A_2(2V0K)
GLMU_HAEIN
[Raw transfer]




H2U_A_2(2V0J)
GLMU_HAEIN
[Raw transfer]




MES_M_13(1FXJ)
GLMU_ECOLI
[Raw transfer]




POP_A_7(4G87)
GLMU_MYCTU
[Raw transfer]




POP_A_4(4G3S)
GLMU_MYCTU
[Raw transfer]




MES_M_13(1FXJ)
GLMU_ECOLI
[Raw transfer]




GN1_A_3(4HCQ)
GLMU_MYCTU
[Raw transfer]




GN1_A_2(2QKX)
GLMU_MYCTU
[Raw transfer]




EDO_Y_25(1FWY)
GLMU_ECOLI
[Raw transfer]




PEG_A_4(2V0H)
GLMU_HAEIN
[Raw transfer]




PEG_A_5(2V0I)
GLMU_HAEIN
[Raw transfer]




1 PsiBlast_PDB 99.2575%-105 * C4 *4AAW - GLMU_STRR6 -
2 PsiBlast_PDB 97.2075%-107 - C4 -4AC3 - GLMU_STRR6 -
6 PsiBlast_PDB 97.1775%-103 - C4 -1HM8 - GLMU_STRPN -
22 PsiBlast_CBE 97.0575%-102 - C4 -1HM8 - GLMU_STRPN -
86 HHSearch 97.0476%-104 - C4 -1HM9 8.7 GLMU_STRPN
108 Fugue 96.8475%-103 - C4 -1HM9 8.7 GLMU_STRPN
5 PsiBlast_PDB 96.8475%-103 - C4 -1HM9 8.7 GLMU_STRPN
3 PsiBlast_PDB 96.5075%-107 - C4 -1G95 - GLMU_STRPN -
21 PsiBlast_CBE 96.0975%-101 - C4 -1HM9 8.6 GLMU_STRPN
4 PsiBlast_PDB 95.1575%-105 - C4 -1G97 9.0 GLMU_STRPN
23 PsiBlast_CBE 94.9175%-106 - C4 -1HM0 - GLMU_STRPN -
7 PsiBlast_PDB 94.7075%-106 - C4 -1HM0 - GLMU_STRPN -
18 PsiBlast_PDB 82.7941% -94 - C4 -4K6R 6.7 GLMU_MYCTO
12 PsiBlast_PDB 82.7741% -96 - C4 -3ST8 5.9 GLMU_MYCTU
15 PsiBlast_PDB 82.5741% -97 - C4 -4G3P 7.4 ?
8 PsiBlast_PDB 82.4841% -97 - C4 -3D8V 5.8 GLMU_MYCTU
85 HHSearch 82.1241% -96 - C4 -2V0H 2.1 GLMU_HAEIN
14 PsiBlast_PDB 81.9941% -99 - C4 -4HCQ 3.6 GLMU_MYCTU
16 PsiBlast_PDB 81.7741% -96 - C4 -4G3Q 7.2 GLMU_MYCTU
11 PsiBlast_PDB 81.6841% -96 - C4 -3SPT 5.6 GLMU_MYCTU
17 PsiBlast_PDB 81.4341% -97 - C4 -4G3S 6.6 GLMU_MYCTU
34 PsiBlast_CBE 80.9942%-100 - C4 -4KNX 6.5 GLMU_HAEIN
37 PsiBlast_CBE 80.7942%-102 - C4 -2W0W 7.8 GLMU_HAEIN
13 PsiBlast_PDB 80.6841% -98 - C4 -4G87 6.9 GLMU_MYCTU
32 PsiBlast_CBE 80.6542%-100 - C4 -4KPZ 4.8 GLMU_HAEIN
36 PsiBlast_CBE 80.6042%-104 - C4 -4E1K 5.4 GLMU_HAEIN
43 PsiBlast_CBE 80.3642% -99 - C4 -2V0I 5.9 GLMU_HAEIN
33 PsiBlast_CBE 80.2642%-100 - C4 -4KPX 5.4 GLMU_HAEIN
42 PsiBlast_CBE 80.2342%-100 - C4 -2V0J 4.1 GLMU_HAEIN
35 PsiBlast_CBE 80.1742%-100 - C4 -4KNR 6.2 GLMU_HAEIN
40 PsiBlast_CBE 80.0042%-101 - C4 -2V0L 4.0 GLMU_HAEIN
10 PsiBlast_PDB 79.8841% -93 - C4 -3DJ4 7.3 GLMU_MYCTU
41 PsiBlast_CBE 79.5842%-100 - C4 -2V0K 3.1 GLMU_HAEIN
31 PsiBlast_CBE 79.2842%-100 - C4 -4KQL 6.9 GLMU_HAEIN
38 PsiBlast_CBE 79.1442% -99 - C4 -2W0V 6.2 GLMU_HAEIN
27 PsiBlast_CBE 78.8741% -94 - C4 -2OI6 6.8 GLMU_ECOLI
20 PsiBlast_PDB 78.2841% -94 - C4 -2OI5 6.8 GLMU_ECOLI
29 PsiBlast_CBE 77.7941% -91 - C4 -1HV9 7.9 GLMU_ECOLI
25 PsiBlast_CBE 77.7841% -92 - C4 -2OI7 6.3 GLMU_ECOLI
26 PsiBlast_CBE 77.3041% -93 - C4 -2OI6 8.3 GLMU_ECOLI
28 PsiBlast_CBE 77.2141% -93 - C4 -2OI5 8.0 GLMU_ECOLI
109 Fugue 77.1640% -91 - C4 -1HV9 6.5 GLMU_ECOLI
19 PsiBlast_PDB 77.1041% -93 - C4 -1HV9 6.5 GLMU_ECOLI
24 PsiBlast_CBE 76.3241% -92 - C4 -2OI7 7.7 GLMU_ECOLI
45 PsiBlast_CBE 73.0441%-101 - C4 -2QKX 3.5 GLMU_MYCTU
111 Fugue 70.5979%-108 - C4 -1G97 8.9 GLMU_STRPN
110 Fugue 63.3234% -91 - C4 -1FXJ 2.8 GLMU_ECOLI
48 PsiBlast_CBE 63.2237% -93 - C4 -1FWY 6.5 GLMU_ECOLI
49 PsiBlast_CBE 63.1737% -96 - C4 -1FWY 6.3 GLMU_ECOLI
47 PsiBlast_CBE 61.8137% -94 - C4 -1FXJ 2.8 GLMU_ECOLI