@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1648: (2015-12-09 )
MTKTIFESKTEGNWFLGSFQAFNYFTCFGNDESYEAIQDVFHRLLSTLKVEGLQLHVVQMTSDFQLLAFLVDMINQEYSRHIKVTQHKGAILVSEDDQLFLVHLPKEGTSLEKFFDLKNDNNFGDTILIATHNEGKTKEFRELFGKLGLKVENLNDYPDLPEVEETGMTFEENARLKAETISKLTGKMVISDDSGLKVDALGGLPGVWSARFSGPDATDARNNAKLLHELAMVFDKERRSAQFHTTLVVSAPNKESLVVEAEWPGYIGTEPKGENGFGYDPLFIVGEGSRTAAELSAQEKNNLSHRGQAVRKLMEVFPKWQLEN

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ITT_A_11(2Q16)
RDGB_ECOLI
[Raw transfer]



IMP_D_11(3S86)
NTPA_THEMA
[Raw transfer]



IMP_B_7(3S86)
NTPA_THEMA
[Raw transfer]



IMP_A_5(3S86)
NTPA_THEMA
[Raw transfer]



IMP_C_9(3S86)
NTPA_THEMA
[Raw transfer]



IMP_A_16(2DVN)
NTPA_PYRHO
[Raw transfer]



IMP_A_2(2PYU)
RDGB_ECOLI
[Raw transfer]



IMP_B_17(2DVN)
NTPA_PYRHO
[Raw transfer]
1 PsiBlast_PDB 95.5346% -59 - C4 -1K7K - RDGB_ECOLI -
27 HHSearch 94.1943% -52 - C4 -3TQU - NTPA_COXBU -
3 PsiBlast_PDB 93.8946% -54 - C4 -2Q16 8.5 RDGB_ECOLI
2 PsiBlast_PDB 93.7646% -60 - C4 -2PYU 5.1 RDGB_ECOLI
4 PsiBlast_PDB 91.2843% -53 - C4 -3TQU - NTPA_COXBU -
21 PsiBlast_CBE 86.9743% -59 - C4 -4BNQ - NTPA_STAAN -
5 PsiBlast_PDB 86.0743% -42 - C4 -4BNQ - NTPA_STAAN -
15 PsiBlast_PDB 81.9631% -48 - C4 -1B78 - NTPA_METJA -
14 PsiBlast_PDB 81.6831% -49 - C4 -2MJP - NTPA_METJA -
6 PsiBlast_PDB 80.7735% -33 - C4 -1VP2 - NTPA_THEMA -
29 HHSearch 80.3434% -35 - C4 -1VP2 - NTPA_THEMA -
25 PsiBlast_CBE 80.2135% -31 - C4 -1VP2 - NTPA_THEMA -
17 PsiBlast_PDB 80.0827% -33 - C4 -2CAR - ITPA_HUMAN -
26 PsiBlast_CBE 80.0231% -32 - C4 -2DVN 6.1 NTPA_PYRHO
16 PsiBlast_PDB 79.9527% -28 - C4 -2I5D - ITPA_HUMAN -
22 PsiBlast_CBE 79.5535% -28 - C4 -3S86 6.3 NTPA_THEMA
7 PsiBlast_PDB 79.4135% -31 - C4 -3S86 6.3 NTPA_THEMA
12 PsiBlast_PDB 79.1731% -25 - C4 -2DVP - NTPA_PYRHO -
24 PsiBlast_CBE 79.1535% -31 - C4 -3S86 6.2 NTPA_THEMA
30 HHSearch 78.8928% -41 - C4 -1V7R - NTPA_PYRHO -
23 PsiBlast_CBE 78.6435% -28 - C4 -3S86 6.4 NTPA_THEMA
10 PsiBlast_PDB 77.0431% -26 - C4 -2DVN 7.2 NTPA_PYRHO