@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1664: (2015-12-09 )
MSKTYHFIGIKGSGMSALALMLHQMGHNVQGSDVDKYYFTQRGLEQAGVTILPFSPNNISEDLEIIAGNAFRPDNNEELAYVIEKGYHFKRYHEFLGDFMRQFTSLGVAGAHGKTSTTGLLAHVLKNITDTSFLIGDGTGRGSANANYFVFEADEYERHFMPYHPEYSIITNIDFDHPDYFTGLEDVFNAFNDYAKQVQKGLFIYGEDSKLHEITSKAPIYYYGFEDSNDFIAKDITRTVNGSDFKVFYNQEEIGQFHVPAYGKHNILNATAVIANLYIMGIDMALVAEHLKTFSGVKRRFTEKIIDDTVIIDDFAHHPTEIIATLDAARQKYPSKEIVAIFQPHTFTRTIALLDDFAHALSQADSVYLAQIYGSAREVDNGEVKVEDLAAKIVKHSDLVTVENVSPLLNHDNAVYVFMGAGDIQLYERSFEELLANLTKNTQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_8(1P3D)
MURC_HAEIN
[Raw transfer]




ANP_A_8(1P3D)
MURC_HAEIN
[Raw transfer]




ACP_A_3(1GQY)
MURC_HAEIN
[Raw transfer]




AMP_A_3(4HV4)
MURC_YERPE
[Raw transfer]




GOL_A_14(4BUC)
MURD_THEMA
[Raw transfer]




4 PsiBlast_PDB 94.4630% -94 - C2 -4HV4 6.6 MURC_YERPE
1 PsiBlast_PDB 94.3830% -87 - C2 -1GQY 5.9 MURC_HAEIN
68 HHSearch 93.2730% -94 * C2 *1P3D 8.7 MURC_HAEIN
3 PsiBlast_PDB 92.9329% -86 - C2 -2F00 - MURC_ECOLI -
7 PsiBlast_PDB 89.9029% -79 - C2 -1P3D 9.1 MURC_HAEIN
6 PsiBlast_PDB 89.8629% -80 - C2 -1P31 - MURC_HAEIN -
73 HHSearch 76.2028%-101 - C2 -3EAG - ? -
8 PsiBlast_PDB 75.8928%-111 - C2 -3EAG - ? -
70 HHSearch 74.0021% -74 - C2 -3LK7 - MURD_STRA5 -
5 PsiBlast_PDB 68.9931% 5 - C2 -1J6U - MURC_THEMA -
97 Fugue 67.9220% -73 - C2 -4BUC 2.8 MURD_THEMA
74 HHSearch 67.4518% -87 - C2 -2VOS - ? -
9 PsiBlast_PDB 65.3325% -78 - C2 -3LK7 - MURD_STRA5 -
66 HHSearch 65.0930% 5 - C2 -1J6U - MURC_THEMA -
76 HHSearch 63.5014% -97 - C2 -1O5Z - ? -
2 PsiBlast_PDB 61.4830% -9 - C2 -3HN7 - ? -
75 HHSearch 59.4417% -81 - C2 -3NRS - ? -
67 HHSearch 58.5929% -2 - C2 -3HN7 - ? -
12 PsiBlast_PDB 55.9623% -85 - C2 -4ZIY - ? -
11 PsiBlast_PDB 55.8323% -86 - C2 -4QDI - ? -