@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1692: (2015-12-09 )
MRKTEHHKMEYVFETIKAITKTNPKVEQIKDLPAIHYLGQSEQVIPILSGGGSGHEPAHFGYVGEGMLSAAISGPIFVPPCASDILETIRFINRGKGVFVIIKNFEADLEEFSQAIEQARQEGIPIKYIVSHDDISVETSNFKIRNRGVAGTVLLHKIIGQAALEGASLDELEQLGLSLTTSMATLGVASKSATILGQHQPVFDLEEGYISFGIGIHGEPGYRTMPFVSMEHLANELVNKLKMKLRWQDGEAFILLINNLGGSSKMEELLFTNAVMEFLALDDLQLPFIKTGHLITSLDMAGLSVTLCRVKDSRWIDYLKHKTDARAW

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_3(2IU6)
DHAQ_LACLA
[Raw transfer]




GOL_B_4(2IU6)
DHAQ_LACLA
[Raw transfer]




GOL_A_5(1OI2)
DHAK_ECOLI
[Raw transfer]




GOL_A_5(1OI2)
DHAK_ECOLI
[Raw transfer]




2HA_C_6(3CT4)
DHAK_LACLA
[Raw transfer]




2HA_A_4(3CT4)
DHAK_LACLA
[Raw transfer]




2HA_B_5(3CT4)
DHAK_LACLA
[Raw transfer]




2HA_A_4(3CT4)
DHAK_LACLA
[Raw transfer]




HIQ_A_7(2IU4)
DHAQ_LACLA
[Raw transfer]




HIQ_B_8(2IU4)
DHAQ_LACLA
[Raw transfer]




HIQ_B_8(2IU4)
DHAQ_LACLA
[Raw transfer]




HIQ_B_8(2IU4)
DHAQ_LACLA
[Raw transfer]




1 PsiBlast_PDB 98.5754%-110 - C6 -2IU6 2.5 DHAQ_LACLA
21 PsiBlast_CBE 97.3954%-109 - C6 -2IU6 3.2 DHAQ_LACLA
36 HHSearch 90.6239% -91 - C6 -3CT4 2.7 DHAK_LACLA
24 PsiBlast_CBE 89.4840%-101 - C6 -3CT4 2.6 DHAK_LACLA
3 PsiBlast_PDB 89.4840%-103 - C6 -3CT4 2.7 DHAK_LACLA
23 PsiBlast_CBE 89.0340%-102 - C6 -3CT4 2.6 DHAK_LACLA
27 PsiBlast_CBE 87.8633% -96 - C6 -4LRX - DHAK_ECOLI -
6 PsiBlast_PDB 87.3033% -93 - C6 -4LRX - DHAK_ECOLI -
5 PsiBlast_PDB 87.2333% -98 - C6 -1UOE - DHAK_ECOLI -
7 PsiBlast_PDB 87.1233% -96 - C6 -1OI2 - DHAK_ECOLI -
25 PsiBlast_CBE 87.1133% -96 - C6 -4LRY - DHAK_ECOLI -
28 PsiBlast_CBE 87.0933% -97 - C6 -1UOD - DHAK_ECOLI -
37 HHSearch 87.0035% -86 * C6 *1OI2 2.4 DHAK_ECOLI
30 PsiBlast_CBE 86.8833% -97 - C6 -1OI2 - DHAK_ECOLI -
31 PsiBlast_CBE 86.8036%-105 - C6 -3PNK - DHAK_ECOLI -
10 PsiBlast_PDB 86.7636%-108 - C6 -3PNK - DHAK_ECOLI -
9 PsiBlast_PDB 86.7433% -94 - C6 -1UOD - DHAK_ECOLI -
26 PsiBlast_CBE 86.6933% -98 - C6 -1UOE - DHAK_ECOLI -
29 PsiBlast_CBE 86.5233% -99 - C6 -1OI3 - DHAK_ECOLI -
4 PsiBlast_PDB 86.4933% -94 - C6 -4LRY - DHAK_ECOLI -
52 Fugue 86.2434% -92 - C6 -1OI2 2.4 DHAK_ECOLI
22 PsiBlast_CBE 75.8354% -96 - C6 -2IU4 20.2 DHAQ_LACLA
2 PsiBlast_PDB 75.0054% -98 - C6 -2IU4 21.6 DHAQ_LACLA
35 HHSearch 74.6451% -96 - C6 -2IU4 4.2 DHAQ_LACLA