@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1718: (2015-12-10 )
MTKALISIDYTYDFVADDGKLTAGKPAQSIASAIADVTEKAYRSGDYIFFAIDNHDIGDVFHPETNLFPEHNIKGTSGRNLYGPLGTLYETIKEDSRVFWIDKRHYSAFSGTDLDIRLRERRIDTLILTGVLTDICVLHTAIDAYNLGYKIEVPAAAVASLNDSNHQWALNHFKTVLGATIL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NCA_B_7(3O94)
?
[Raw transfer]




NCA_C_9(3O94)
?
[Raw transfer]




NCA_D_11(3O94)
?
[Raw transfer]




NCA_A_5(3O94)
?
[Raw transfer]




NCA_A_5(3O94)
?
[Raw transfer]




CAD_D_12(3S2S)
?
[Raw transfer]




CAD_C_10(3S2S)
?
[Raw transfer]




CAD_A_6(3S2S)
?
[Raw transfer]




21 PsiBlast_CBE 97.3277%-127 - C5 -3S2S 2.7 ?
22 PsiBlast_CBE 96.6777%-126 - C5 -3S2S 2.8 ?
1 PsiBlast_PDB 96.0977%-123 - C5 -3S2S 2.7 ?
25 PsiBlast_CBE 95.0971%-131 - C5 -3O90 - ? -
31 PsiBlast_CBE 93.9470%-120 - C5 -3O93 - ? -
24 PsiBlast_CBE 93.5771%-124 - C5 -3O90 - ? -
28 PsiBlast_CBE 93.5670%-124 - C5 -3O94 3.9 ?
2 PsiBlast_PDB 93.2771%-125 - C5 -3O90 - ? -
30 PsiBlast_CBE 93.1570%-122 - C5 -3O93 - ? -
69 HHSearch 92.8971%-123 - C5 -3O94 3.9 ?
29 PsiBlast_CBE 92.8470%-122 - C5 -3O94 4.0 ?
27 PsiBlast_CBE 92.7270%-124 - C5 -3O94 3.9 ?
6 PsiBlast_PDB 92.6770%-118 - C5 -3O93 - ? -
32 PsiBlast_CBE 92.6270%-119 - C5 -3O93 - ? -
3 PsiBlast_PDB 92.5770%-123 - C5 -3O94 3.9 ?
26 PsiBlast_CBE 91.9971%-121 - C5 -3O90 - ? -
4 PsiBlast_PDB 84.1370% -94 - C5 -3O91 - ? -
37 PsiBlast_CBE 84.0470% -94 - C5 -3O91 - ? -
36 PsiBlast_CBE 83.8570% -94 - C5 -3O91 - ? -
34 PsiBlast_CBE 83.4370% -94 - C5 -3O92 - ? -