@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1724: (2015-12-10 )
MNSLNGETLLTGLIANPARHSLSPLMWNTSFQEKNMNYAYLTFEVEEGKLTEAVRGVRALGIRGVNVSMPFKQSVIPLLDDLSPQAKLVGAVNTIVNQGGTGRLVGHMTDGIGCFKALAAQGFSAKNKIVTIAGIGGSGKAVAVQAAMEGVAEIRLFNRNSSNYDKVIDLSDKIKKQFQIKVVVDYLENKTAFKDAIRTSHFYIDATSLGMRPLDNYSLINDPEILTPNLVVVDLVYKPKETALLRFVRQNGVKHAYNGLGMLIYQGAEAFQLITNQEMPISSVERVLQTEN

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_5(3TNL)
AROE_LISMO
[Raw transfer]




NAD_C_10(3TNL)
AROE_LISMO
[Raw transfer]




NAD_A_5(3TNL)
AROE_LISMO
[Raw transfer]




NAP_B_7(2HK9)
AROE_AQUAE
[Raw transfer]




NAP_C_9(2HK9)
AROE_AQUAE
[Raw transfer]




NAP_B_6(1NVT)
AROE_METJA
[Raw transfer]




NAP_D_11(2HK9)
AROE_AQUAE
[Raw transfer]




NAD_B_8(3TNL)
AROE_LISMO
[Raw transfer]




NAD_B_5(3T4E)
YDIB_SALTY
[Raw transfer]




NAD_D_13(3TNL)
AROE_LISMO
[Raw transfer]




NAD_A_3(3T4E)
YDIB_SALTY
[Raw transfer]




NAD_A_3(3T4E)
YDIB_SALTY
[Raw transfer]




NAD_A_5(1VI2)
YDIB_ECOLI
[Raw transfer]




NAP_A_5(1NVT)
AROE_METJA
[Raw transfer]




NAD_A_3(1NPD)
YDIB_ECOLI
[Raw transfer]




NAD_A_3(1O9B)
YDIB_ECOLI
[Raw transfer]




SKM_A_6(2HK9)
AROE_AQUAE
[Raw transfer]




SKM_A_2(3DOO)
AROE_STAEQ
[Raw transfer]




SKM_A_6(2HK9)
AROE_AQUAE
[Raw transfer]




SKM_A_7(2D5C)
AROE_THET8
[Raw transfer]




DTV_A_20(1NYT)
AROE_ECOLI
[Raw transfer]




2 PsiBlast_PDB 99.0342%-113 - C7 -3TNL 9.1 AROE_LISMO
26 PsiBlast_CBE 98.6942%-114 - C7 -3TOZ - AROE_LISMO -
23 PsiBlast_CBE 98.6742%-112 - C7 -3TOZ - AROE_LISMO -
72 HHSearch 98.6142%-110 * C7 *3TNL 9.1 AROE_LISMO
27 PsiBlast_CBE 98.5342%-116 - C7 -3TOZ - AROE_LISMO -
29 PsiBlast_CBE 98.4242%-113 - C7 -3TNL 8.9 AROE_LISMO
30 PsiBlast_CBE 98.3842%-114 - C7 -3TNL 9.3 AROE_LISMO
28 PsiBlast_CBE 98.3442%-115 - C7 -3TNL 9.8 AROE_LISMO
25 PsiBlast_CBE 98.2142%-116 - C7 -3TOZ - AROE_LISMO -
22 PsiBlast_CBE 97.9742%-113 - C7 -3TOZ - AROE_LISMO -
24 PsiBlast_CBE 97.9042%-114 - C7 -3TOZ - AROE_LISMO -
21 PsiBlast_CBE 97.7842%-114 - C7 -3TOZ - AROE_LISMO -
1 PsiBlast_PDB 97.7842%-114 - C7 -3TOZ - AROE_LISMO -
31 PsiBlast_CBE 95.5840%-113 - C7 -3T4E 9.1 YDIB_SALTY
6 PsiBlast_PDB 95.4740%-113 - C7 -3T4E 9.6 YDIB_SALTY
5 PsiBlast_PDB 95.3039%-111 - C7 -1VI2 8.5 YDIB_ECOLI
3 PsiBlast_PDB 95.2339%-105 - C7 -1NPD 8.4 YDIB_ECOLI
71 HHSearch 95.1439%-112 - C7 -3T4E 9.6 YDIB_SALTY
4 PsiBlast_PDB 94.7039%-112 - C7 -1O9B 8.2 YDIB_ECOLI
74 HHSearch 86.8136% -98 - C7 -1NVT 8.1 AROE_METJA
9 PsiBlast_PDB 85.5035%-101 - C7 -2HK9 4.0 AROE_AQUAE
34 PsiBlast_CBE 84.6435%-103 - C7 -2HK9 9.8 AROE_AQUAE
32 PsiBlast_CBE 84.0335% -99 - C7 -2HK9 10.6 AROE_AQUAE
36 PsiBlast_CBE 84.0237% -97 - C7 -1NVT 7.0 AROE_METJA
33 PsiBlast_CBE 83.9135% -98 - C7 -2HK9 9.3 AROE_AQUAE
86 HHSearch 83.4036% -91 - C7 -2HK9 4.0 AROE_AQUAE
75 HHSearch 77.6830% -85 - C7 -2D5C 3.8 AROE_THET8
13 PsiBlast_PDB 75.1631% -85 - C7 -3DOO 2.6 AROE_STAEQ