@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1728: (2015-12-10 )
MISSYHRPTRALIDLEAIANNVKSVQEHIPSDKKTFAVVKANAYGHGAVEVSKYIESIVDGFCVSNLDEAIELRQAGIVKMILVLGVVMPEQVILAKNENITLTVASLEWLRLCQTSAVDLSGLEVHIKVDSGMGRIGVRQLDEGNKLISELGESGASVKGIFTHFATADEADNCKFNQQLTFFKDFISGLDNCPDLVHASNSATSLWHSETIFNAVRLGVVMYGLNPSGTDLDLPYPINPALSLESELVHVKQLHDGSQVGYGATYQVTGDEFVGTVPIGYADGWTRDMQGFSVIVNGELCEIIGRVSMDQMTIRLPQKYTIGTKVTLIGQQGSCNITTTDVAQKRQTINYEVLCLLSDRIPRYY

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BME_A_5(3OO2)
ALR1_STAAC
[Raw transfer]



DCS_C_6(3E6E)
?
[Raw transfer]



IN5_A_3(1BD0)
ALR_GEOSE
[Raw transfer]



IN5_A_3(1BD0)
ALR_GEOSE
[Raw transfer]



IN5_B_4(1BD0)
ALR_GEOSE
[Raw transfer]



DCS_A_4(3E6E)
?
[Raw transfer]



DCS_B_5(3E6E)
?
[Raw transfer]



IN5_A_3(1BD0)
ALR_GEOSE
[Raw transfer]



IN5_A_3(1BD0)
ALR_GEOSE
[Raw transfer]



PLP_B_7(3E5P)
?
[Raw transfer]



PLP_C_10(3E5P)
?
[Raw transfer]



DCS_A_3(4LUT)
?
[Raw transfer]



PLP_A_4(3E5P)
?
[Raw transfer]



PLP_A_3(4A3Q)
ALR1_STAAM
[Raw transfer]



PLP_A_5(1SFT)
ALR_GEOSE
[Raw transfer]



PLP_B_11(4A3Q)
ALR1_STAAM
[Raw transfer]



PLP_B_6(1SFT)
ALR_GEOSE
[Raw transfer]



PLP_A_3(1XFC)
ALR_MYCTU
[Raw transfer]



PLP_A_3(3CO8)
LYSR_OENOB
[Raw transfer]



PLP_A_3(3CO8)
LYSR_OENOB
[Raw transfer]



PLP_A_3(1XFC)
ALR_MYCTU
[Raw transfer]



2PE_C_9(3E5P)
?
[Raw transfer]
21 PsiBlast_CBE 93.2349%-112 - C2 -3E6E 5.5 ?
24 PsiBlast_CBE 93.1949%-110 - C2 -3E5P 3.5 ?
3 PsiBlast_PDB 93.0945%-108 - C2 -1SFT 4.3 ALR_GEOSE
25 PsiBlast_CBE 92.6745%-105 - C2 -1SFT 5.3 ALR_GEOSE
2 PsiBlast_PDB 92.3249%-104 - C2 -3E6E 6.1 ?
22 PsiBlast_CBE 92.3149%-105 - C2 -3E6E 5.5 ?
23 PsiBlast_CBE 91.7249%-110 - C2 -3E5P 3.3 ?
4 PsiBlast_PDB 91.7145%-106 - C2 -1BD0 7.4 ALR_GEOSE
1 PsiBlast_PDB 91.6649%-106 - C2 -3E5P 4.2 ?
41 HHSearch 91.2546%-108 - C2 -1BD0 7.4 ALR_GEOSE
39 HHSearch 91.1549%-106 - C2 -3E5P 2.2 ?
26 PsiBlast_CBE 91.0945%-105 - C2 -1BD0 7.7 ALR_GEOSE
6 PsiBlast_PDB 90.8242%-125 - C2 -4ILS - ALR_GEOSE -
5 PsiBlast_PDB 89.1643%-110 - C2 -3HA1 - ? -
28 PsiBlast_CBE 85.9740%-104 - C2 -3OO2 Error ALR1_STAAC
9 PsiBlast_PDB 85.4140%-108 - C2 -3OO2 - ALR1_STAAC -
27 PsiBlast_CBE 84.5840%-107 - C2 -4A3Q 3.7 ALR1_STAAM
13 PsiBlast_PDB 84.0038%-113 - C2 -4LUS - ? -
8 PsiBlast_PDB 83.9740%-109 - C2 -4A3Q 3.8 ALR1_STAAM
12 PsiBlast_PDB 83.5238%-111 - C2 -4LUT 5.1 ?
43 HHSearch 83.1937%-106 - C2 -3CO8 3.4 LYSR_OENOB
11 PsiBlast_PDB 83.1436%-107 - C2 -3CO8 3.4 LYSR_OENOB
16 PsiBlast_PDB 76.1930%-106 - C2 -1XFC 3.8 ALR_MYCTU
45 HHSearch 74.9330%-100 - C2 -1XFC 3.8 ALR_MYCTU
32 Fugue 69.1842%-114 - C2 -1BD0 6.7 ALR_GEOSE
30 Fugue 65.8840%-105 - C2 -1BD0 6.7 ALR_GEOSE