@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1814: (2015-12-10 )
MPTINQLVRKPRKSKVEKSDSPALNIGYNSHRKVHTKLSAPQKRGVATRVGTMTPKKPNSALRKFARVRLSNLIEVTAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGALDTAGVADRKQGRSKYGAKRPKG

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_W_22(4B3R)
RS12_THET8
[Raw transfer]
-
NACID_W_22(4B3T)
RS12_THET8
[Raw transfer]
-
CHAIN_Z_2(1N34)
RS12_THET8
[Raw transfer]
-
NACID_X_2(2UUC)
RS12_THET8
[Raw transfer]
-
NACID_X_2(2VQE)
RS12_THET8
[Raw transfer]
-
NACID_W_22(4B3M)
RS12_THET8
[Raw transfer]
-
NACID_X_2(2UUA)
RS12_THET8
[Raw transfer]
-
CHAIN_X_2(2UU9)
RS12_THET8
[Raw transfer]
-
NACID_W_22(4AQY)
RS12_THET8
[Raw transfer]
-
CHAIN_W_22(3T1Y)
RS12_THET8
[Raw transfer]
-
NACID_X_2(2UUB)
RS12_THET8
[Raw transfer]
-
NACID_X_2(2VQE)
RS12_THET8
[Raw transfer]
-
CHAIN_X_22(4JV5)
RS12_THET8
[Raw transfer]
-
CHAIN_X_22(4K0K)
RS12_THET8
[Raw transfer]
-
60 Fugue 90.2873% -60 - C2 -1FJG - RS12_THET8 -
8 PsiBlast_PDB 88.9669% -60 - C2 -4ADV - RS12_ECOLI -
7 PsiBlast_PDB 88.6769% -60 - C2 -4A2I - RS12_ECOLI -
1 PsiBlast_PDB 88.4169% -79 - C2 -3DEG - RS12_ECOLI -
11 PsiBlast_PDB 88.2667% -67 - C2 -4OX9 - RS12_THET8 -
30 PsiBlast_CBE 87.9367% -75 - C2 -4AQY Error RS12_THET8
20 PsiBlast_PDB 87.8667% -60 - C2 -4GKJ - RS12_THET8 -
70 HHSearch 87.7573% -57 * C2 *2VQE Error RS12_THET8
13 PsiBlast_PDB 87.7167% -69 - C2 -4KHP - RS12_THET8 -
12 PsiBlast_PDB 87.4067% -77 - C2 -4K0K 3.6 RS12_THET8
27 PsiBlast_CBE 87.2567% -59 - C2 -3T1Y Error RS12_THET8
14 PsiBlast_PDB 87.0067% -70 - C2 -4JV5 3.7 RS12_THET8
25 PsiBlast_CBE 86.4867% -71 - C2 -4B3R Error RS12_THET8
59 PsiBlast_CBE 86.2666% -73 - C2 -4JI3 - RS12_THET8 -
43 PsiBlast_CBE 86.2667% -77 - C2 -1N34 Error RS12_THET8
26 PsiBlast_CBE 86.2367% -72 - C2 -4B3M Error RS12_THET8
23 PsiBlast_CBE 86.1667% -71 - C2 -4B3T Error RS12_THET8
37 PsiBlast_CBE 86.0667% -68 - C2 -2UUA Error RS12_THET8
36 PsiBlast_CBE 86.0567% -73 - C2 -2UUB Error RS12_THET8
35 PsiBlast_CBE 85.9267% -64 - C2 -2UUC Error RS12_THET8
38 PsiBlast_CBE 85.8067% -66 - C2 -2UU9 Error RS12_THET8
32 PsiBlast_CBE 83.8467% -63 - C2 -2VQE Error RS12_THET8