@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1839: (2015-12-11 )
MTNILEVKNLTKIFGKKQKAALEMVKQGKSKTEILEKTGATVGVYDASFEIKEGEIFVIMGLSGSGKSTLVRMLNRLIDPSSGNIYLDGKDIAKMNVEDLRNIRRHDINMVFQNFGLFPHRTILENTEFGLEMRGVSKEERTMLAEKALDNAGLLPFKDQYPSQLSGGMQQRVGLARALANSPKILLMDEAFSALDPLIRREMQDELLDLQDTNKQTIIFISHDLNEALRIGDRIALMKDGEIMQIGTGEEILTNPANDFVREFVEDVDRSKVLTAQNIMIKPLTTVLEIDGPQVALTRMHREEVSMLMATNRRRQLLGSLTADAAIEARKKGLPLSEVIDKDVVTVSKDTVITDIMPLIYDSSAPIAVTDDNDRLLGVIIRGRVIEALANVQDETVVESPKETVEA

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_J_5(3C41)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ATP_J_5(4YMU)
?
[Raw transfer]



ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ADP_B_6(2Q0H)
?
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]
110 Fugue 83.3629% -75 - C2 -3TUZ - METN_ECOLI -
26 PsiBlast_CBE 82.2339% -94 - C2 -4U02 - ? -
7 PsiBlast_PDB 81.8739% -95 - C2 -4U02 - ? -
25 PsiBlast_CBE 81.8439% -94 - C2 -4U02 - ? -
6 PsiBlast_PDB 81.3939% -96 - C2 -4U00 5.8 ?
24 PsiBlast_CBE 81.2939% -94 - C2 -4U02 - ? -
113 Fugue 80.9228% -66 - C2 -1OXS - ? -
111 Fugue 80.6227% -69 - C2 -1Z47 - ? -
11 PsiBlast_PDB 79.1840% -94 - C2 -4YMV 3.8 ?
27 PsiBlast_CBE 79.0440% -93 - C2 -4YMV 3.7 ?
8 PsiBlast_PDB 78.8640% -95 - C2 -4YMS - ? -
28 PsiBlast_CBE 78.7840% -95 - C2 -4YMU 4.3 ?
9 PsiBlast_PDB 78.7240% -98 - C2 -4YMT - ? -
10 PsiBlast_PDB 78.6040% -94 - C2 -4YMU 4.7 ?
12 PsiBlast_PDB 77.9040% -93 - C2 -4YMW - ? -
106 PsiBlast_CBE 76.6935% -90 - C2 -1B0U - HISP_SALTY -
96 PsiBlast_CBE 75.8336% -63 - C2 -4M1M - MDR1A_MOUSE -
97 PsiBlast_CBE 75.6736% -70 - C2 -4M1M - MDR1A_MOUSE -
98 PsiBlast_CBE 74.6835% -77 - C2 -4LSG - MDR1A_MOUSE -
99 PsiBlast_CBE 74.6435% -76 - C2 -4LSG - MDR1A_MOUSE -
46 PsiBlast_CBE 69.1739% -78 - C2 -2OLK 4.1 ?
35 PsiBlast_CBE 68.9539% -69 - C2 -3C41 3.9 ?
37 PsiBlast_CBE 68.4639% -75 - C2 -3C4J 3.2 ?
47 PsiBlast_CBE 68.0039% -74 - C2 -2OLK 3.9 ?
48 PsiBlast_CBE 67.9539% -76 - C2 -2OLK 3.8 ?
45 PsiBlast_CBE 67.7839% -73 - C2 -2OLK 4.0 ?
36 PsiBlast_CBE 67.4839% -68 - C2 -3C41 5.1 ?
50 PsiBlast_CBE 67.4039% -76 - C2 -2OLJ 3.9 ?
39 PsiBlast_CBE 66.8839% -71 - C2 -2Q0H 3.8 ?
38 PsiBlast_CBE 65.7439% -73 - C2 -3C4J 4.7 ?
40 PsiBlast_CBE 65.5039% -71 - C2 -2Q0H 3.4 ?
79 PsiBlast_CBE 65.4942% -78 - C2 -3TIF 4.1 Y796_METJA
77 PsiBlast_CBE 65.1642% -79 - C2 -1L2T 4.3 Y796_METJA
49 PsiBlast_CBE 65.0639% -68 - C2 -2OLJ 3.7 ?