@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1853: (2015-12-11 )
MTKRLPNLQVALDHSDLQGAIKAAVSVGHEVDVIEAGTVCLLQVGSELVEVLRSLFPDKIIVADTKCADAGGTVAKNNAVRGADWMTCICCATIPTMEAALKAIKEERGDRGEIQIELYGDWTYEQAQQWLDAGISQAIYHQSRDALLAGETWGEKDLNKVKKLIDMGFRVSVTGGLSTDTLQLFEGVDVFTFIAGRGITEADDPAAAARAFKDEIKRIWG

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TX4_B_5(1SO3)
ULAD_ECOLI
[Raw transfer]




TX4_B_5(1SO6)
ULAD_ECOLI
[Raw transfer]




TX4_B_6(1Q6L)
ULAD_ECOLI
[Raw transfer]




TX4_A_6(1SO3)
ULAD_ECOLI
[Raw transfer]




TX4_A_5(1SO4)
ULAD_ECOLI
[Raw transfer]




LG6_A_5(1Q6O)
ULAD_ECOLI
[Raw transfer]




LG6_A_6(1KW1)
ULAD_ECOLI
[Raw transfer]




TX4_A_6(1SO5)
ULAD_ECOLI
[Raw transfer]




TX4_B_6(1SO4)
ULAD_ECOLI
[Raw transfer]




LG6_B_6(1Q6O)
ULAD_ECOLI
[Raw transfer]




LXP_A_5(1Q6Q)
ULAD_ECOLI
[Raw transfer]




TX4_B_5(1SO5)
ULAD_ECOLI
[Raw transfer]




TX4_A_5(1Q6L)
ULAD_ECOLI
[Raw transfer]




LG6_B_5(1KW1)
ULAD_ECOLI
[Raw transfer]




LXP_B_6(1Q6Q)
ULAD_ECOLI
[Raw transfer]




5RP_D_6(3EXS)
?
[Raw transfer]




5RP_A_3(1XBY)
ULAD_ECOLI
[Raw transfer]




5RP_B_4(1XBV)
ULAD_ECOLI
[Raw transfer]




TX4_A_6(1SO6)
ULAD_ECOLI
[Raw transfer]




LX1_B_6(1XBZ)
ULAD_ECOLI
[Raw transfer]




5RP_B_4(1XBY)
ULAD_ECOLI
[Raw transfer]




5RP_A_3(1XBV)
ULAD_ECOLI
[Raw transfer]




LX1_A_5(1Q6R)
ULAD_ECOLI
[Raw transfer]




LX1_A_5(1XBZ)
ULAD_ECOLI
[Raw transfer]




5RP_B_4(1XBX)
ULAD_ECOLI
[Raw transfer]




LX1_B_6(1Q6R)
ULAD_ECOLI
[Raw transfer]




HMS_A_3(1XBX)
ULAD_ECOLI
[Raw transfer]




EDO_A_5(3JR2)
?
[Raw transfer]




21 PsiBlast_CBE 97.3890%-115 - C1 -3EXS 4.4 ?
3 PsiBlast_PDB 97.2290%-120 - C1 -3EXT - ? -
1 PsiBlast_PDB 97.1490%-116 - C1 -3EXR - ? -
23 PsiBlast_CBE 96.2090%-121 - C1 -3EXS - ? -
2 PsiBlast_PDB 95.8990%-119 - C1 -3EXS - ? -
22 PsiBlast_CBE 95.4090%-117 - C1 -3EXS - ? -
42 HHSearch 92.4787%-110 - C1 -3EXR - ? -
24 PsiBlast_CBE 83.2649%-114 - C1 -1XBV 3.9 ULAD_ECOLI
27 PsiBlast_CBE 83.0049%-114 - C1 -1Q6O 5.1 ULAD_ECOLI
34 PsiBlast_CBE 82.1249%-116 - C1 -1SO3 4.9 ULAD_ECOLI
12 PsiBlast_PDB 82.1249%-113 - C1 -1SO4 4.9 ULAD_ECOLI
9 PsiBlast_PDB 81.8649%-113 - C1 -1Q6R 4.3 ULAD_ECOLI
32 PsiBlast_CBE 81.7949%-113 - C1 -1SO4 5.1 ULAD_ECOLI
43 HHSearch 81.7250%-112 - C1 -1Q6O 5.0 ULAD_ECOLI
25 PsiBlast_CBE 81.3349%-111 - C1 -1Q6R 4.1 ULAD_ECOLI
36 PsiBlast_CBE 81.1748%-111 - C1 -1XBZ 4.7 ULAD_ECOLI
28 PsiBlast_CBE 81.1549%-111 - C1 -1Q6L 4.8 ULAD_ECOLI
8 PsiBlast_PDB 81.0749%-115 - C1 -1Q6Q 4.7 ULAD_ECOLI
29 PsiBlast_CBE 80.9949%-110 - C1 -1KW1 4.6 ULAD_ECOLI
5 PsiBlast_PDB 80.7949%-110 - C1 -1KW1 4.8 ULAD_ECOLI
35 PsiBlast_CBE 80.7148%-116 - C1 -1SO6 5.0 ULAD_ECOLI
14 PsiBlast_PDB 80.4749%-108 - C1 -1SO3 4.7 ULAD_ECOLI
16 PsiBlast_PDB 80.3648%-111 - C1 -1XBX 4.6 ULAD_ECOLI
37 PsiBlast_CBE 80.3548%-111 - C1 -1XBX 4.5 ULAD_ECOLI
31 PsiBlast_CBE 80.1949%-109 - C1 -1SO5 4.8 ULAD_ECOLI
10 PsiBlast_PDB 80.0549%-109 - C1 -1XBV 4.1 ULAD_ECOLI
6 PsiBlast_PDB 80.0349%-107 - C1 -1Q6L 4.7 ULAD_ECOLI
17 PsiBlast_PDB 80.0248%-112 - C1 -1XBZ 4.6 ULAD_ECOLI
13 PsiBlast_PDB 79.9348%-110 - C1 -1XBY 4.7 ULAD_ECOLI
15 PsiBlast_PDB 79.9248%-109 - C1 -1SO6 4.0 ULAD_ECOLI
26 PsiBlast_CBE 79.8749%-113 - C1 -1Q6Q 4.6 ULAD_ECOLI
11 PsiBlast_PDB 79.8349%-109 - C1 -1SO5 5.0 ULAD_ECOLI
33 PsiBlast_CBE 79.7948%-111 - C1 -1XBY 4.5 ULAD_ECOLI
57 HHSearch 77.5642%-110 - C1 -3JR2 2.7 ?