@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1859: (2015-12-11 )
MTSVVVVGTQWGDEGKGKITDFLSADAEVIARYQGGDNAGHTIVIDNKKFKLHLIPSGIFFKEKISVIGNGVVVNPKSLVKELAYLHGEGVTTDNLRISDRAHVILPYHIKLDQLQEDAKGDNKIGTTIKGIGPAYMDKAARVGIRIADLLDREVFAERLKINLAEKNRLFEKMYDSTPLEFDDIFEEYYEYGQQIKQYVTDTSVILNDALDAGKRVLFEGAQGVMLDIDQGTYPFVTSSNPVAGGVTIGSGVGPSKINKVVGVCKAYTSRVGDGPFPTELFDEVGDRIREIGKEYGTTTGRPRRVGWFDSVVMRHSRRVSGITNLSLNSIDVLSGLDTVKICVAYDLDGKRIDYYPASLEQLKRCKPIYEELPGWSEDITACRSLDDLPENARNYVRRVGELVGVRISTFSVGPGREQTNILESVWSNI

Atome Classification :

(44 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

RPD_A_5(1QF4)
PURA_ECOLI
[Raw transfer]




DOI_A_3(2DGN)
PURA1_MOUSE
[Raw transfer]




2SA_A_5(1MEZ)
PURA1_MOUSE
[Raw transfer]




DOI_A_3(2GCQ)
PURA_ECOLI
[Raw transfer]




RPL_A_5(1QF5)
PURA_ECOLI
[Raw transfer]




RPL_A_5(1QF5)
PURA_ECOLI
[Raw transfer]




IMP_C_3(1KJX)
PURA_ECOLI
[Raw transfer]




IMP_A_8(1IWE)
PURA1_MOUSE
[Raw transfer]




AMP_A_3(4M9D)
PURA_BACAN
[Raw transfer]




IMP_E_5(1KKB)
PURA_ECOLI
[Raw transfer]




IMP_A_5(1KKF)
PURA_ECOLI
[Raw transfer]




AMP_C_3(1SON)
PURA_ECOLI
[Raw transfer]




AMP_E_5(1MF1)
PURA1_MOUSE
[Raw transfer]




H5P_A_6(1SOO)
PURA_ECOLI
[Raw transfer]




GDP_A_6(1P9B)
PURA_PLAFA
[Raw transfer]




GDP_A_4(1CIB)
PURA_ECOLI
[Raw transfer]




GDP_A_6(1P9B)
PURA_PLAFA
[Raw transfer]




GPX_A_4(1CH8)
PURA_ECOLI
[Raw transfer]




GDP_A_6(1LNY)
PURA1_MOUSE
[Raw transfer]




GDP_A_5(1CG0)
PURA_ECOLI
[Raw transfer]




GDP_A_4(2GCQ)
PURA_ECOLI
[Raw transfer]




GDP_A_5(1LON)
PURA1_MOUSE
[Raw transfer]




GDP_D_4(1DJ3)
PURA_WHEAT
[Raw transfer]




GDP_A_4(1CG4)
PURA_ECOLI
[Raw transfer]




GDP_D_4(1DJ2)
PURA_ARATH
[Raw transfer]




DPO_A_3(1KKF)
PURA_ECOLI
[Raw transfer]




GDP_C_3(1DJ3)
PURA_WHEAT
[Raw transfer]




GTP_C_3(1LOO)
PURA1_MOUSE
[Raw transfer]




GDP_A_5(1CG3)
PURA_ECOLI
[Raw transfer]




GDP_A_5(1MF0)
PURA1_MOUSE
[Raw transfer]




GDP_A_5(1CG1)
PURA_ECOLI
[Raw transfer]




GDP_A_4(2DGN)
PURA1_MOUSE
[Raw transfer]




GDP_B_7(1LNY)
PURA1_MOUSE
[Raw transfer]




GCP_B_4(1HOP)
PURA_ECOLI
[Raw transfer]




GDP_C_3(1DJ2)
PURA_ARATH
[Raw transfer]




GDP_C_3(1DJ2)
PURA_ARATH
[Raw transfer]




HAD_C_3(1KKB)
PURA_ECOLI
[Raw transfer]




GDP_A_2(2V40)
PURA2_HUMAN
[Raw transfer]




GDP_A_2(2V40)
PURA2_HUMAN
[Raw transfer]




IMP_B_7(1IWE)
PURA1_MOUSE
[Raw transfer]




CIT_A_2(3R7T)
PURA_CAMJE
[Raw transfer]




2 PsiBlast_PDB 97.9574% -79 - C3 -4M9D 6.6 PURA_BACAN
1 PsiBlast_PDB 97.4674% -88 - C3 -4M0G - PURA_BACAN -
23 PsiBlast_CBE 88.9547% -81 - C3 -3UE9 - PURA_BURTA -
5 PsiBlast_PDB 88.9447% -66 - C3 -1CH8 7.4 PURA_ECOLI
40 HHSearch 88.7647% -73 - C3 -3HID - PURA_YERPE -
6 PsiBlast_PDB 88.5947% -70 - C3 -1QF4 7.4 PURA_ECOLI
17 PsiBlast_PDB 88.5747% -68 - C3 -1CG1 6.9 PURA_ECOLI
15 PsiBlast_PDB 88.4947% -67 - C3 -1KKB 6.6 PURA_ECOLI
7 PsiBlast_PDB 88.4947% -70 - C3 -1QF5 6.8 PURA_ECOLI
12 PsiBlast_PDB 88.4747% -77 - C3 -1ADE - PURA_ECOLI -
8 PsiBlast_PDB 88.4047% -69 - C3 -1CIB 6.7 PURA_ECOLI
49 Fugue 88.3847% -68 * C3 *1QF5 6.8 PURA_ECOLI
18 PsiBlast_PDB 88.3147% -68 - C3 -1CG3 7.3 PURA_ECOLI
16 PsiBlast_PDB 88.2547% -66 - C3 -1KKF 7.1 PURA_ECOLI
11 PsiBlast_PDB 88.2347% -71 - C3 -1SOO 5.2 PURA_ECOLI
10 PsiBlast_PDB 88.2247% -68 - C3 -1SON 5.4 PURA_ECOLI
22 PsiBlast_CBE 88.1747% -79 - C3 -3UE9 - PURA_BURTA -
48 Fugue 88.1546% -75 - C3 -1ADE - PURA_ECOLI -
14 PsiBlast_PDB 88.0947% -68 - C3 -1KJX 5.5 PURA_ECOLI
3 PsiBlast_PDB 87.9747% -74 - C3 -3HID - PURA_YERPE -
9 PsiBlast_PDB 87.9447% -67 - C3 -2GCQ 8.5 PURA_ECOLI
19 PsiBlast_PDB 87.8747% -68 - C3 -1CG4 7.4 PURA_ECOLI
4 PsiBlast_PDB 87.6547% -66 - C3 -1CG0 7.5 PURA_ECOLI
36 PsiBlast_CBE 87.2545% -70 - C3 -1IWE 6.2 PURA1_MOUSE
39 HHSearch 86.9842% -79 - C3 -2V40 5.6 PURA2_HUMAN
35 PsiBlast_CBE 86.8645% -73 - C3 -1IWE 5.8 PURA1_MOUSE
21 PsiBlast_CBE 86.7847% -76 - C3 -1HOP 5.5 PURA_ECOLI
34 PsiBlast_CBE 86.7445% -70 - C3 -1LNY 6.2 PURA1_MOUSE
31 PsiBlast_CBE 86.5645% -76 - C3 -1LOO 5.6 PURA1_MOUSE
37 PsiBlast_CBE 86.4942% -83 - C3 -2V40 5.6 PURA2_HUMAN
27 PsiBlast_CBE 86.4945% -71 - C3 -2DGN 7.8 PURA1_MOUSE
28 PsiBlast_CBE 86.2145% -71 - C3 -1MF1 5.6 PURA1_MOUSE
33 PsiBlast_CBE 86.1145% -70 - C3 -1LNY 6.4 PURA1_MOUSE
44 HHSearch 86.0641% -65 - C3 -1P9B 7.4 PURA_PLAFA
30 PsiBlast_CBE 86.0645% -70 - C3 -1MEZ 7.1 PURA1_MOUSE
32 PsiBlast_CBE 85.7345% -70 - C3 -1LON 6.1 PURA1_MOUSE
29 PsiBlast_CBE 85.0845% -69 - C3 -1MF0 5.7 PURA1_MOUSE
42 HHSearch 85.0745% -73 - C3 -1DJ2 6.3 PURA_ARATH
38 PsiBlast_CBE 85.0541% -73 - C3 -1P9B 7.6 PURA_PLAFA
26 PsiBlast_CBE 84.8646% -73 - C3 -1DJ2 6.3 PURA_ARATH
25 PsiBlast_CBE 84.5246% -72 - C3 -1DJ2 5.8 PURA_ARATH
43 HHSearch 82.3745% -74 - C3 -3R7T 3.3 PURA_CAMJE
24 PsiBlast_CBE 82.3144% -69 - C3 -1DJ3 6.4 PURA_WHEAT
20 PsiBlast_PDB 82.2844% -70 - C3 -1DJ3 6.1 PURA_WHEAT