@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1869: (2015-12-11 )
MSHYSIKLQEVFRLAQFQAARYESHYLESWHLLLAMVLVHDSVAGLTFAEYESEVAIEEYEAATILALGRAPKEEITNYQFLEQSPALKKILKLAENISIVVGAEDVGTEHVLLAMLVNKDLLATRILELVGFRGQDDGESVRMVDLRKALERHAGFTKDDIKAIYELRNPKKAKSGASFSDMMKPPSTAGDLADFTRDLSQMAVDGEIEPVIGRDKEISRMVQVLSRKTKNNPVLVGDAGVGKTALAYGLAQRIANGNIPYELRDMRVLELDMMSVVAGTRFRGDFEERMNQIIADIEEDGHIILFIDELHTIMGSGSGIDSTLDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVLVEEPNLEDAYEILLGLKPAYEAFHNVTISDEAVMTAVKVAHRYLTSKNLPDSAIDLLDEASATVQMMIKKNAPSLLTEVDQAILDDDMKSASKALKASYKGKKRKPIAVTEDHIMATLSRLSGIPVEKLTQADSKKYLNLEKELHKRVIGQDDAVTAISRAIRRNQSGIRTGKRPIGSFMFLGPTGVGKTELAKALAEVLFDDESALIRFDMSEYMEKFAASHLNGAPPGYVGYDEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDISHDYTAMQKRIMEELKKAYRPEFINRIDEKVVFHSLSQDNMREVVKIMVKPLILALKDKGMDLKFQPSALKHLAEDGYDIEMGARPLRRTIQTQVEDHLSELLLANQVKEGQVIKIGVSKGKLKFDIAKS

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_2(4LJA)

[Raw transfer]



ACP_A_2(4LJ9)

[Raw transfer]



ADP_A_3(4CIU)
CLPB_ECOLI
[Raw transfer]



MNT_C_8(4LJ7)

[Raw transfer]



ADP_A_2(4LJ5)

[Raw transfer]



MNT_A_4(4LJ7)
CLPB_THET8
[Raw transfer]



MNT_B_6(4LJ7)
CLPB_THET8
[Raw transfer]



ADP_A_4(4FCV)
CLPB_THET8
[Raw transfer]



ADP_A_4(4FCW)
CLPB_THET8
[Raw transfer]



ADP_D_6(4FD2)

[Raw transfer]



ADP_A_4(4FD2)
CLPB_THET8
[Raw transfer]



ADP_B_5(4FD2)
CLPB_THET8
[Raw transfer]
69 Fugue 91.8743% -87 * C3 *1QVR - CLPB_THET8 -
44 HHSearch 89.2545% -98 - C4 -3PXI - CLPC_BACSU -
5 PsiBlast_PDB 87.9042%-105 - C4 -3PXI - CLPC_BACSU -
43 HHSearch 84.0238% -91 - C4 -1R6B - CLPA_ECOLI -
7 PsiBlast_PDB 77.8443% -87 - C2 -1R6B - CLPA_ECOLI -
6 PsiBlast_PDB 77.2943% -86 - C2 -1KSF - CLPA_ECOLI -
17 PsiBlast_PDB 69.7950% -97 - C2 -4CIU 6.8 CLPB_ECOLI
21 PsiBlast_CBE 69.0850% -98 - C2 -1QVR - CLPB_THET8 -
22 PsiBlast_CBE 68.8850% -94 - C2 -1QVR - CLPB_THET8 -
8 PsiBlast_PDB 68.7750% -95 - C2 -1QVR - CLPB_THET8 -
24 PsiBlast_CBE 68.3652%-101 - C2 -4LJ7 6.9 CLPB_THET8
11 PsiBlast_PDB 67.9052% -96 - C2 -4LJ7 9.3 CLPB_THET8
23 PsiBlast_CBE 67.3652%-102 - C2 -4LJ7 8.2
10 PsiBlast_PDB 67.2653% -96 - C2 -4LJ5 6.5
26 PsiBlast_CBE 66.7453% -97 - C2 -4FD2 6.1 CLPB_THET8
9 PsiBlast_PDB 66.3953% -93 - C2 -4LJ4 - -
25 PsiBlast_CBE 66.3153% -97 - C2 -4FD2 5.8
19 PsiBlast_PDB 66.3052% -97 - C2 -4FCV 6.6 CLPB_THET8
13 PsiBlast_PDB 65.9652% -92 - C2 -4LJA 7.0
20 PsiBlast_PDB 65.9052% -95 - C2 -4FCW 7.3 CLPB_THET8
18 PsiBlast_PDB 65.7553% -96 - C2 -4FD2 6.4 CLPB_THET8
12 PsiBlast_PDB 65.7252% -86 - C2 -4LJ9 6.5