@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1883: (2015-12-11 )
MSAIDKLVKASHLIDMNDIIREGNPTLRKVAEEVTFPLSEKEEILGEKMMQFLKHSQDPIMAEKLGLRGGVGLAAPQLDISKRIIAVLVPNVEDAQGNPPKEAYSLQEVMYNPKVVSHSVQDAALSDGEGCLSVDREVPGYVVRHARVTIEYFDKTGEKHRLKLKGYNSIVVQHEIDHIDGIMFYDRINEKNPFAVKEGLLILE

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SB8_A_4(2AIA)
DEF_STRR6
[Raw transfer]



BB2_A_3(2OS3)
DEF_STRP1
[Raw transfer]



BB2_A_6(2OS1)
DEF_ENTFA
[Raw transfer]



EPE_B_6(1VEY)
DEF_LEPIN
[Raw transfer]



BB2_A_5(3UWB)
?
[Raw transfer]



BB2_A_4(1LQY)
DEF2_GEOSE
[Raw transfer]



SB9_P_4(2AIE)
DEF_STRR6
[Raw transfer]



SB7_A_4(2AI7)
DEF_STRR6
[Raw transfer]



EPE_A_5(1VEY)
DEF_LEPIN
[Raw transfer]



BB2_B_7(2OKL)
DEF2_BACCR
[Raw transfer]



5LI_P_4(3SW8)
?
[Raw transfer]



FMT_A_8(1VEV)
DEF_LEPIN
[Raw transfer]



MES_B_6(1VEV)
DEF_LEPIN
[Raw transfer]



FMT_A_13(1Y6H)
DEF_LEPIN
[Raw transfer]



FMT_A_13(1Y6H)
DEF_LEPIN
[Raw transfer]



BRR_B_7(1RL4)
?
[Raw transfer]



BRR_A_5(1RL4)
?
[Raw transfer]



BRR_A_5(1RL4)
?
[Raw transfer]



FMT_B_18(1VEZ)
DEF_LEPIN
[Raw transfer]



FMT_A_12(1VEZ)
DEF_LEPIN
[Raw transfer]



FMT_B_9(1VEV)
DEF_LEPIN
[Raw transfer]



MES_A_5(1VEV)
DEF_LEPIN
[Raw transfer]



GLY_B_5(1Y6H)
DEF_LEPIN
[Raw transfer]



DTT_B_6(1SV2)
DEF_LEPIN
[Raw transfer]



DTT_A_5(1SV2)
DEF_LEPIN
[Raw transfer]



EOH_A_4(2W3T)
DEF_ECOLI
[Raw transfer]



CHAIN_F_3(3G6N)
?
[Raw transfer]
-
CHAIN_G_4(3G6N)
?
[Raw transfer]
-
BB2_B_6(2OKL)
DEF2_BACCR
[Raw transfer]



BB2_B_6(2OKL)
DEF2_BACCR
[Raw transfer]
1 PsiBlast_PDB 97.9883%-103 - C5 -3SW8 5.2 ?
2 PsiBlast_PDB 97.8582%-105 - C5 -2AIE 4.4 DEF_STRR6
4 PsiBlast_PDB 97.3482%-103 - C5 -2AIA 5.7 DEF_STRR6
3 PsiBlast_PDB 96.4882%-103 - C5 -2AI7 4.3 DEF_STRR6
5 PsiBlast_PDB 95.8878% -96 - C5 -2OS3 5.8 DEF_STRP1
112 HHSearch 89.0368%-102 - C5 -2OS0 - DEF_ENTFA -
8 PsiBlast_PDB 89.0267%-100 - C5 -2OS1 6.3 DEF_ENTFA
9 PsiBlast_PDB 88.5766%-102 - C5 -2OS0 - DEF_ENTFA -
7 PsiBlast_PDB 88.3567% -98 - C5 -3G6N 2.8 ?
22 PsiBlast_CBE 88.0967% -99 - C5 -3G6N 2.8 ?
21 PsiBlast_CBE 88.0667%-102 - C5 -3CMD - ? -
6 PsiBlast_PDB 87.9267% -98 - C5 -3CMD - ? -
12 PsiBlast_PDB 82.4051% -91 - C5 -1LQW - DEF_STAAU -
24 PsiBlast_CBE 81.8251% -86 - C5 -2AI9 - DEF_STAAU -
25 PsiBlast_CBE 81.7851% -84 - C5 -1LQW - DEF_STAAU -
10 PsiBlast_PDB 80.9053% -83 - C5 -1LQY 6.5 DEF2_GEOSE
13 PsiBlast_PDB 80.8051% -89 - C5 -2AI9 - DEF_STAAU -
14 PsiBlast_PDB 78.6851% -64 - C5 -1LMH - DEF_STAAU -
113 HHSearch 78.2652% -78 - C5 -2OKL 3.1 DEF2_BACCR
23 PsiBlast_CBE 77.9252% -73 - C5 -2OKL 6.3 DEF2_BACCR
11 PsiBlast_PDB 77.0152% -68 - C5 -2OKL 3.1 DEF2_BACCR
17 PsiBlast_PDB 70.6333% -77 - C5 -1SV2 2.0 DEF_LEPIN
35 PsiBlast_CBE 70.6033% -78 - C5 -1VEY 3.3 DEF_LEPIN
37 PsiBlast_CBE 69.6633% -74 - C5 -1SV2 2.4 DEF_LEPIN
16 PsiBlast_PDB 69.5333% -76 - C5 -1Y6H 3.4 DEF_LEPIN
36 PsiBlast_CBE 69.3733% -78 - C5 -1VEV 3.1 DEF_LEPIN
18 PsiBlast_PDB 69.0433% -71 - C5 -1VEV 3.0 DEF_LEPIN
19 PsiBlast_PDB 68.8133% -74 - C5 -1VEY 3.3 DEF_LEPIN
20 PsiBlast_PDB 68.7333% -77 - C5 -1VEZ 3.2 DEF_LEPIN
33 PsiBlast_CBE 68.7233% -75 - C5 -1Y6H 3.2 DEF_LEPIN
128 HHSearch 68.6835% -75 - C5 -1RL4 4.1 ?
34 PsiBlast_CBE 68.4433% -77 - C5 -1VEZ 3.2 DEF_LEPIN
117 HHSearch 67.1933% -65 - C5 -1Y6H 3.4 DEF_LEPIN
39 PsiBlast_CBE 66.9433% -75 - C5 -1RL4 4.1 ?
38 PsiBlast_CBE 66.7633% -70 - C5 -1RL4 4.3 ?
120 HHSearch 66.2337% -63 - C5 -3UWB 6.1 ?