@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1891: (2015-12-11 )
MTEQFLKDNFSLEGKVALITGASYGIGFSIATAFARAGATIVFNDIKQELVDKGISAYKKLGIKAHGYVCDVTDEDGINEMVDKISQDVGVIDILVNNAGIIKRTPMLEMSAADFRQVIDIDLNAPFIVSKAVLPGMIQKGHGKIINICSMMSELGRETVAAYAAAKGGLKMLTKNIASEYGSANIQCNGIGPGYIATPQTAPLRERQDDGSRHPFDQFIIAKTPAARWGEAEDLGAPAIFLASDASNFINGHILYVDGGILAYIGKQPQ

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GCO_A_4(3O03)
?
[Raw transfer]



EDO_B_10(4G81)
?
[Raw transfer]



GOL_A_7(4G81)
?
[Raw transfer]



NAP_A_3(3UF0)
?
[Raw transfer]



NAP_A_3(3O03)
?
[Raw transfer]



EDO_D_5(4G81)
?
[Raw transfer]



EDO_B_22(3RRO)
FABG_VIBCH
[Raw transfer]



EDO_A_11(3RRO)
FABG_VIBCH
[Raw transfer]
1 PsiBlast_PDB 91.5899%-119 - C1 -4U8G - ? -
3 PsiBlast_PDB 85.3283%-117 - C1 -3O03 10.0 ?
4 PsiBlast_PDB 84.7685%-112 - C1 -4Z9X - ? -
2 PsiBlast_PDB 83.5083%-113 - C1 -3CXR - ? -
24 PsiBlast_CBE 70.4241%-100 - C1 -4IBO - ? -
25 PsiBlast_CBE 69.5141%-102 - C1 -4IBO - ? -
60 PsiBlast_CBE 69.4735%-118 - C1 -4BO6 - FABG_PSEAE -
97 PsiBlast_CBE 68.7735%-113 - C1 -4BNU - FABG_PSEAE -
57 PsiBlast_CBE 68.5735%-115 - C1 -4BO7 - FABG_PSEAE -
65 PsiBlast_CBE 68.4435%-113 - C1 -4BO4 - FABG_PSEAE -
5 PsiBlast_PDB 68.2645%-100 - C1 -4G81 3.0 ?
84 PsiBlast_CBE 68.0235%-116 - C1 -4BNY - FABG_PSEAE -
95 PsiBlast_CBE 67.9835%-117 - C1 -4BNV - FABG_PSEAE -
21 PsiBlast_CBE 67.7945% -99 - C1 -4G81 - ? -
26 PsiBlast_CBE 67.7841% -98 - C1 -4IBO - ? -
91 PsiBlast_CBE 67.7035%-111 - C1 -4BNW - FABG_PSEAE -
81 PsiBlast_CBE 67.6835%-113 - C1 -4BNZ - FABG_PSEAE -
73 PsiBlast_CBE 67.6535%-114 - C1 -4BO2 - FABG_PSEAE -
94 PsiBlast_CBE 67.5535%-117 - C1 -4BNV - FABG_PSEAE -
23 PsiBlast_CBE 67.5545%-100 - C1 -4G81 2.5 ?
22 PsiBlast_CBE 67.3445% -99 - C1 -4G81 2.3 ?
49 PsiBlast_CBE 62.6136% -91 - C1 -3RRO 2.7 FABG_VIBCH
50 PsiBlast_CBE 61.1236% -92 - C1 -3RRO 1.6 FABG_VIBCH
113 HHSearch 58.2439% -91 - C1 -3UF0 3.6 ?