@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1910: (2015-12-11 )
MAVLILGGAGYIGSHMVDQLITQGKEKVIVVDNLVTGHRQAVHSDAIFYEGDLSDKTFMRQVFRENPDVDAVIHFAAFSLVAESMENPLKYFDNNTAGMIKLLEVMNECDIKNIVFSSTAATYGIPEQVPILETAPQNPINPYGESKLMMETIMKWADQAYGIKFVALRYFNVAGDKPDGSIGEDHKPETHLLPIILQVAQGVRDKIMIFGDDYNTPDGTNVRDYVHPFDLADAHILAVDYLRQGNESNVFNLGSSTGFSNLQMLEAARRITGKEIPAQKAARRPGDPDTLIASSEKARQILGWEPKFDNIDKIISSAWAWHSSHPNGYED

Atome Classification :

(55 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_7(1HZJ)
GALE_HUMAN
[Raw transfer]




NAD_A_3(3ENK)
?
[Raw transfer]




NAD_B_10(1I3N)
GALE_HUMAN
[Raw transfer]




NAD_A_5(4LIS)
?
[Raw transfer]




NAD_A_3(3ENK)
?
[Raw transfer]




NAI_A_5(1EK6)
GALE_HUMAN
[Raw transfer]




NAI_A_5(1EK6)
GALE_HUMAN
[Raw transfer]




NAD_B_5(3ENK)
?
[Raw transfer]




NAI_B_7(1EK6)
GALE_HUMAN
[Raw transfer]




NAD_B_10(1I3M)
GALE_HUMAN
[Raw transfer]




NAD_B_10(1I3L)
GALE_HUMAN
[Raw transfer]




NAD_A_5(1UDA)
GALE_ECOLI
[Raw transfer]




NAD_B_9(1HZJ)
GALE_HUMAN
[Raw transfer]




NAD_A_5(1UDB)
GALE_ECOLI
[Raw transfer]




NAD_B_10(1I3K)
GALE_HUMAN
[Raw transfer]




NAD_A_5(1UDC)
GALE_ECOLI
[Raw transfer]




NAD_A_5(1UDB)
GALE_ECOLI
[Raw transfer]




NAD_A_5(1Z45)
GAL10_YEAST
[Raw transfer]




NAD_A_8(1I3M)
GALE_HUMAN
[Raw transfer]




NAD_A_6(1KVR)
GALE_ECOLI
[Raw transfer]




NAD_C_16(4LIS)
?
[Raw transfer]




NAD_A_8(1I3N)
GALE_HUMAN
[Raw transfer]




NAD_A_5(1A9Z)
GALE_ECOLI
[Raw transfer]




NAD_A_5(1Z45)
GAL10_YEAST
[Raw transfer]




NAD_A_5(1KVU)
GALE_ECOLI
[Raw transfer]




NAD_A_3(1KVT)
GALE_ECOLI
[Raw transfer]




NAD_A_9(1I3L)
GALE_HUMAN
[Raw transfer]




NAD_A_6(1A9Y)
GALE_ECOLI
[Raw transfer]




NAD_A_8(1I3K)
GALE_HUMAN
[Raw transfer]




NAD_A_4(1XEL)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1LRL)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1KVQ)
GALE_ECOLI
[Raw transfer]




NAD_B_6(2UDP)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1KVS)
GALE_ECOLI
[Raw transfer]




NAD_B_11(4LIS)
?
[Raw transfer]




NAD_A_2(4WOK)
?
[Raw transfer]




NAD_A_4(1NAH)
GALE_ECOLI
[Raw transfer]




NAD_A_2(4TWR)
?
[Raw transfer]




NAD_A_4(2UDP)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1NAI)
GALE_ECOLI
[Raw transfer]




NAD_C_3(1EK5)
GALE_HUMAN
[Raw transfer]




NAD_A_4(1LRJ)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1LRK)
GALE_ECOLI
[Raw transfer]




GUD_A_4(3ENK)
?
[Raw transfer]




EDO_A_10(1UDC)
GALE_ECOLI
[Raw transfer]




EDO_A_6(1XEL)
GALE_ECOLI
[Raw transfer]




23 PsiBlast_CBE 97.5953% -99 - C1 -2C20 - ? -
71 HHSearch 94.6354% -97 - C1 -2C20 - ? -
25 PsiBlast_CBE 94.4153% -96 - C1 -2C20 - ? -
1 PsiBlast_PDB 94.0253% -97 - C1 -2C20 - ? -
22 PsiBlast_CBE 93.7553% -98 - C1 -2C20 - ? -
21 PsiBlast_CBE 93.3753% -95 - C1 -2C20 - ? -
24 PsiBlast_CBE 92.3853% -96 - C1 -2C20 - ? -
80 HHSearch 85.8740% -92 * C1 *3ENK 12.1 ?
6 PsiBlast_PDB 84.2440% -91 - C1 -3ENK 12.1 ?
79 HHSearch 83.7141% -92 - C1 -1UDB 11.5 GALE_ECOLI
64 Fugue 83.0540% -91 - C1 -1Z45 12.2 GAL10_YEAST
27 PsiBlast_CBE 82.2842% -95 - C1 -1GY8 - ? -
85 HHSearch 82.1047% -91 - C1 -1GY8 - ? -
30 PsiBlast_CBE 81.6940% -90 - C1 -3ENK 12.0 ?
29 PsiBlast_CBE 81.3642% -94 - C1 -1GY8 - ? -
17 PsiBlast_PDB 80.9039% -85 - C1 -1XEL 11.5 GALE_ECOLI
8 PsiBlast_PDB 80.8739% -87 - C1 -1LRK 11.2 GALE_ECOLI
28 PsiBlast_CBE 80.0842% -93 - C1 -1GY8 - ? -
19 PsiBlast_PDB 79.5139% -84 - C1 -1KVQ 11.1 GALE_ECOLI
3 PsiBlast_PDB 79.4442% -92 - C1 -2CNB - ? -
35 PsiBlast_CBE 78.8839% -88 - C1 -1Z45 12.2 GAL10_YEAST
34 PsiBlast_CBE 78.5239% -84 - C1 -1A9Z 10.4 GALE_ECOLI
39 PsiBlast_CBE 78.3137% -87 - C1 -4LIS 10.4 ?
9 PsiBlast_PDB 78.1339% -85 - C1 -1LRL 11.1 GALE_ECOLI
75 HHSearch 78.0540% -87 - C1 -1EK6 12.1 GALE_HUMAN
12 PsiBlast_PDB 77.8539% -83 - C1 -1LRJ 10.7 GALE_ECOLI
40 PsiBlast_CBE 77.8337% -85 - C1 -4LIS 10.7 ?
20 PsiBlast_PDB 77.7939% -85 - C1 -1KVT 10.4 GALE_ECOLI
15 PsiBlast_PDB 77.7239% -83 - C1 -1UDA 11.6 GALE_ECOLI
18 PsiBlast_PDB 77.4939% -83 - C1 -1KVR 11.6 GALE_ECOLI
16 PsiBlast_PDB 77.1439% -84 - C1 -1UDB 11.5 GALE_ECOLI
13 PsiBlast_PDB 76.6739% -82 - C1 -1NAH 11.2 GALE_ECOLI
38 PsiBlast_CBE 76.5837% -84 - C1 -4LIS 10.9 ?
11 PsiBlast_PDB 76.5539% -84 - C1 -1UDC 11.6 GALE_ECOLI
51 PsiBlast_CBE 76.5438% -91 - C1 -1EK5 10.1 GALE_HUMAN
7 PsiBlast_PDB 76.5339% -85 - C1 -1KVS 10.3 GALE_ECOLI
31 PsiBlast_CBE 76.3039% -85 - C1 -2UDP 10.8 GALE_ECOLI
10 PsiBlast_PDB 76.2739% -84 - C1 -2UDP 11.4 GALE_ECOLI
33 PsiBlast_CBE 76.1739% -83 - C1 -1A9Y 10.8 GALE_ECOLI
5 PsiBlast_PDB 75.9345% -77 - C1 -4WOK 12.9 ?
32 PsiBlast_CBE 74.9839% -82 - C1 -1KVU 10.3 GALE_ECOLI
14 PsiBlast_PDB 74.4839% -83 - C1 -1NAI 11.1 GALE_ECOLI
45 PsiBlast_CBE 73.7738% -86 - C1 -1I3L 11.9 GALE_HUMAN
44 PsiBlast_CBE 73.4138% -84 - C1 -1I3M 11.6 GALE_HUMAN
4 PsiBlast_PDB 73.3445% -77 - C1 -4TWR 13.1 ?
37 PsiBlast_CBE 73.1238% -83 - C1 -1HZJ 11.6 GALE_HUMAN
36 PsiBlast_CBE 73.0438% -83 - C1 -1HZJ 11.1 GALE_HUMAN
47 PsiBlast_CBE 72.9738% -85 - C1 -1I3K 12.0 GALE_HUMAN
48 PsiBlast_CBE 71.8338% -84 - C1 -1I3K 11.6 GALE_HUMAN
46 PsiBlast_CBE 71.6138% -84 - C1 -1I3L 11.9 GALE_HUMAN
50 PsiBlast_CBE 71.5738% -85 - C1 -1EK6 12.2 GALE_HUMAN
42 PsiBlast_CBE 71.5338% -83 - C1 -1I3N 12.0 GALE_HUMAN
43 PsiBlast_CBE 71.2038% -82 - C1 -1I3M 11.4 GALE_HUMAN
41 PsiBlast_CBE 71.2038% -83 - C1 -1I3N 11.4 GALE_HUMAN
49 PsiBlast_CBE 70.4338% -80 - C1 -1EK6 11.1 GALE_HUMAN