@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1911: (2015-12-11 )
MKKHWWHKATIYQIYPRSFMDSDGDGVGDIKGITSKLDYLEKLGITAIWLSPVYQSPMDDNGYDISDYQAIADIFGDMNDMDQLLQEANQRGIKIIMDLVVNHTSDEHAWFVEARENPNSPERDFYIWRDEPNDLTSIFSGSAWEYDKVSGQYYLHLFSKRQPDLNWENEALRHKIYDMMNFWIDKGIGGFRMDVIDLIGKIPDKGITGNGPKLHDYLKEMNRASFGKHDLLTVGETWGATPDIAKQYSNPDNEELSMVFQFEHVGLQHKPDAPKWDYSDGLDVPALKDIFTKWQTQLELGQGWNSLFWNNHDLPRVLSIWGNDSDNRKQSAKALAILLHLMRGTPYIYQGEEIGMTNYPFECLADVDDIESLNYAKEAMDNGVSEATILDSIRKVGRDNARTPMQWSQEHQAGFTKGTPWLAVNPNYQEINVEAALNDTESIFYTYQKLVALRKEHDWLVDADFKLLETADKVFAYVRQTDKERYLIVANLSDQNQSFEFPEAVKETIISNTEVQEVLSSNTLKPWDAFCIELF

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SUC_A_4(4HPH)
?
[Raw transfer]



GLC_A_2(3AXI)
MALX3_YEAST
[Raw transfer]



SUGAR_A_2(2ZID)
DEXB_STRMU
[Raw transfer]
-
BGC_A_6(3WY3)
?
[Raw transfer]



GLC_A_4(4HOZ)
?
[Raw transfer]



BGC_B_10(3WY3)
?
[Raw transfer]



GLO_A_3(4M56)
O16G1_BACSU
[Raw transfer]



GLC_A_2(3A4A)
MALX3_YEAST
[Raw transfer]



TRS_A_5(2ZIC)
DEXB_STRMU
[Raw transfer]



GLC_A_4(4HP5)
?
[Raw transfer]



GOL_A_6(2ZIC)
DEXB_STRMU
[Raw transfer]



NOJ_A_11(3GBE)
?
[Raw transfer]



TRS_A_2(4M8U)
O16G1_BACSU
[Raw transfer]



BGC_A_2(4WLC)
?
[Raw transfer]



TRS_A_2(4MB1)
O16G1_BACSU
[Raw transfer]



TRS_A_2(4MAZ)
O16G1_BACSU
[Raw transfer]



GLO_B_7(4M56)
O16G1_BACSU
[Raw transfer]



BGC_A_8(3WY2)
?
[Raw transfer]



BGC_A_8(3WY2)
?
[Raw transfer]



GOL_A_3(4M8U)
O16G1_BACSU
[Raw transfer]



GOL_A_3(4HOW)
?
[Raw transfer]



GOL_B_11(3WY2)
?
[Raw transfer]



TRS_A_2(4HOX)
?
[Raw transfer]



TRS_A_5(1ZJA)
?
[Raw transfer]



EDO_A_4(3GBD)
?
[Raw transfer]



EDO_A_2(3GBD)
?
[Raw transfer]



GLC_A_3(3AXH)
MALX3_YEAST
[Raw transfer]



GD_A_8(3VX0)
AMYA1_ASPOR
[Raw transfer]
1 PsiBlast_PDB 90.0975% -80 - C1 -2ZIC 3.5 DEXB_STRMU
4 PsiBlast_PDB 90.0674% -79 - C1 -2ZID 6.2 DEXB_STRMU
2 PsiBlast_PDB 89.4074% -78 - C1 -4WLC 4.7 ?
3 PsiBlast_PDB 88.8474% -78 - C1 -4XB3 - ? -
5 PsiBlast_PDB 78.1451% -71 - C1 -1UOK - O16G_BACCE -
8 PsiBlast_PDB 77.8649% -70 - C1 -4MB1 3.4 O16G1_BACSU
6 PsiBlast_PDB 77.4849% -69 - C1 -4M8U 3.1 O16G1_BACSU
97 HHSearch 77.4553% -68 - C1 -1UOK - O16G_BACCE -
7 PsiBlast_PDB 77.3749% -68 - C1 -4M56 2.5 O16G1_BACSU
9 PsiBlast_PDB 77.2749% -69 - C1 -4MAZ 2.9 O16G1_BACSU
21 PsiBlast_CBE 76.3749% -69 - C1 -4M56 2.9 O16G1_BACSU
13 PsiBlast_PDB 75.1841% -74 - C1 -4HP5 4.8 ?
15 PsiBlast_PDB 75.0641% -74 - C1 -1M53 - ? -
11 PsiBlast_PDB 74.9841% -73 - C1 -4HOX 3.0 ?
14 PsiBlast_PDB 74.1741% -73 - C1 -4HOZ 4.0 ?
12 PsiBlast_PDB 73.3341% -71 - C1 -4HPH 4.5 ?
10 PsiBlast_PDB 73.1841% -73 - C1 -4HOW 3.1 ?
58 PsiBlast_CBE 72.6640% -72 - C1 -3GBD 3.1 ?
57 PsiBlast_CBE 72.4940% -71 * C1 *3GBE 3.4 ?
100 HHSearch 72.1042% -65 - C1 -1ZJA 2.7 ?
65 PsiBlast_CBE 65.4332% -61 - C1 -3WY2 3.7 ?
64 PsiBlast_CBE 65.2432% -60 - C1 -3WY2 3.2 ?
70 PsiBlast_CBE 64.0932% -60 - C1 -3WY3 4.0 ?
69 PsiBlast_CBE 63.6432% -59 - C1 -3WY3 4.0 ?
62 PsiBlast_CBE 63.2036% -63 - C1 -3AXI 3.7 MALX3_YEAST
63 PsiBlast_CBE 63.0736% -63 - C1 -3AXH 2.5 MALX3_YEAST
60 PsiBlast_CBE 62.6036% -62 - C1 -3A4A 4.0 MALX3_YEAST
101 HHSearch 62.2235% -61 - C1 -3WY2 3.7 ?