@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1919: (2015-12-11 )
MTLTFGKPSITIRRLGVITSTYMMLGFILLCGFLHPSTIYSEEIKSDINSFISIDDEKTTVPIFDSTLDKLTNSIEERQLELDSDTSDSLIVDDQKDKDMVIVLGDSDSQEKLSPPLKSEIATEENRKQANLAELNATQPNNRTTYIIPESSHSIAEQQRFLIESKGYSVALLNSDEFRKTAREDRGFERDKLRSLDIIPKGDLSTSNVIGNTDIASQISLGFKKNAIQEHHLTKTFSQKDGKLSSVIEGMLAIGKEKVEKEIKYSGNLWQKLKAKAHCLVCCVDNLNFEDIKSYFQYYCHLNHQLKLPKGAILSAKTEVYRGGDFGRKNKDNVFGYRIPSLLKTEKGTLLVGADERIEQACDWGNIGMVIRRSEDDGVTWGKRETIVNLRNNPRVPLVTSGDYSGSPINMDMALVQDTSSKTKRIFSIYDMFPEGRGVISIANTPEKEYTQIGGQSYLNLYNNGKKSKVFTIRDKGIVYNFKGKKTDYHVITETTKSDHSNLGDIYKGKQLLGNIYFTKHKTSPFRLAKSSYVWMSYSDDDGRTWSSPRDITASLRQKGMKFLGIGPGKGIVLKWGPHAGRIIIPAYSTNWKSHLRGSQSSRLIYSDDHGKTWHTGKAVNDNRILSNGEKIHSLTMDNKKEQNTESVPVQLKNGDIKLFMRNLTGNLEVATSKDGGETWQNHVKRYKEVHDAYVQLSAIRFEHDKKEYILLVNANGPGKKRQDGYARLAQVNRNGSFKWLYHHHIQDGSFAYNSVQQLNNDKFGVLYEHREKHQNSFTLNYKVFNWSFLSQNTEKQGTLWEKMAANWHVLFKFYL

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SIA_A_2(2BF6)
?
[Raw transfer]



SIA_A_2(2BF6)
?
[Raw transfer]



SIA_A_3(2YA5)
NANA_STREE
[Raw transfer]



SIA_B_8(2YA5)
NANA_STREE
[Raw transfer]



DAN_A_3(2YA6)
NANA_STREE
[Raw transfer]



DAN_B_8(2YA6)
NANA_STREE
[Raw transfer]



DAN_A_3(2VK6)
?
[Raw transfer]



FSI_A_4(2VK7)
?
[Raw transfer]



FSI_B_6(2VK7)
?
[Raw transfer]



DAN_B_4(3H73)
NANA_STRR6
[Raw transfer]



DAN_A_3(3H73)
NANA_STRR6
[Raw transfer]



SIA_A_3(3H72)
NANA_STRR6
[Raw transfer]



DAN_A_3(2VVZ)
NANA_STREE
[Raw transfer]



SIA_B_4(3H72)
NANA_STRR6
[Raw transfer]



DAN_B_5(2VVZ)
NANA_STREE
[Raw transfer]



G39_B_8(2YA8)
NANA_STREE
[Raw transfer]



G39_A_3(2YA8)
NANA_STREE
[Raw transfer]



EDO_A_6(2YA4)
NANA_STREE
[Raw transfer]



EDO_B_16(2YA4)
NANA_STREE
[Raw transfer]
6 PsiBlast_PDB 98.5560% -44 - C5 -2YA7 - NANA_STREE -
5 PsiBlast_PDB 98.3860% -43 - C5 -2YA6 4.9 NANA_STREE
4 PsiBlast_PDB 98.3760% -43 - C5 -2YA5 5.5 NANA_STREE
22 PsiBlast_CBE 98.1159% -44 - C5 -3H72 5.2 NANA_STRR6
25 PsiBlast_CBE 98.0560% -43 - C5 -2YA7 - NANA_STREE -
27 PsiBlast_CBE 97.9560% -44 - C5 -2YA6 4.4 NANA_STREE
26 PsiBlast_CBE 97.7560% -44 - C5 -2YA7 - NANA_STREE -
29 PsiBlast_CBE 97.7360% -42 - C5 -2YA4 3.8 NANA_STREE
28 PsiBlast_CBE 97.6360% -44 - C5 -2YA5 5.6 NANA_STREE
3 PsiBlast_PDB 97.6360% -41 - C5 -2YA4 3.8 NANA_STREE
7 PsiBlast_PDB 97.5560% -43 - C5 -2YA8 4.4 NANA_STREE
23 PsiBlast_CBE 97.5460% -43 - C5 -2YA8 4.7 NANA_STREE
21 PsiBlast_CBE 97.5259% -43 - C5 -3H73 5.0 NANA_STRR6
24 PsiBlast_CBE 97.4060% -43 - C5 -2YA7 - NANA_STREE -
2 PsiBlast_PDB 97.0859% -44 - C5 -3H73 5.1 NANA_STRR6
8 PsiBlast_PDB 96.3659% -43 - C5 -2VVZ 4.5 NANA_STREE
31 PsiBlast_CBE 96.2959% -43 - C5 -2W20 - NANA_STRR6 -
30 PsiBlast_CBE 96.0859% -45 - C5 -2VVZ 4.4 NANA_STREE
1 PsiBlast_PDB 96.0759% -45 - C5 -3H72 5.0 NANA_STRR6
85 HHSearch 95.8961% -42 - C5 -2W20 - NANA_STRR6 -
11 PsiBlast_PDB 81.8036% -35 - C5 -2BF6 4.6 ?
86 HHSearch 81.3237% -41 - C5 -2BF6 4.6 ?
32 PsiBlast_CBE 80.8536% -32 * C5 *2VK7 4.1 ?
13 PsiBlast_PDB 80.8536% -33 - C5 -2VK6 5.7 ?
14 PsiBlast_PDB 80.7636% -34 - C5 -2VK7 4.3 ?