@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1947: (2015-12-12 )
MTKKIFRTTLSASLGIVLVTILMIMGFLYNYFNHIQREQLRTQTALASQGISFEGKDYFENLKTSNVRITWVDNKGQVLYDTQSDAKHMKNHANRQEIKEAIKSGYGESTRWSATLTEKSIYAAQRLNNGTIVRLSVAQQTIFYLLLGMISPLAIIILLAIILSVLIARYIAKKVSEPLNNIDLDHPLSNDSYEEITPLLRRLDSHQAKIQHQKLLLQKRQKEFDTIISKIKEGMILLDDQARIVSINAEALKLFQINDDWHGRFMMEVSRDLTLKDLIDQGLKGKKKEANIGIENNHYRVLVRPTTDNNRVTGLVVLLFDVTDQLQMEQLQREFTANVSHELKTPLHVISGYSELLANQMVPNEEVPQFAAKIHKESERLVKLVEDIISLSHLDEQEKLPQETVNLYDLTQKVLEGLQAKADKKHIQINFNGEEAILRGNPVLLNSLVYNLCDNAITYNHEKGQVNVTLKNSPDTITLEVSDTGLGIAEKDKKRIFERFYRVDKSRSKIVGGTGLGLSIVKSALDFHNGSIKVDSHLGQGTTMTVLLHKQ

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AN2_B_4(4U7O)
?
[Raw transfer]



ADP_A_3(4JAS)
?
[Raw transfer]



ADP_A_8(4JAV)
?
[Raw transfer]



ATP_A_4(3SL2)

[Raw transfer]



ADP_A_7(3DGE)
?
[Raw transfer]



ATP_A_4(3SL2)

[Raw transfer]



AN2_A_3(4U7O)
?
[Raw transfer]



ADP_B_13(4JAV)
?
[Raw transfer]



ADP_B_8(3DGE)
?
[Raw transfer]



ADP_A_2(2C2A)
?
[Raw transfer]



ADP_A_2(2C2A)
?
[Raw transfer]



ADP_A_2(4JAU)
?
[Raw transfer]
14 PsiBlast_PDB 84.9331% -80 - C3 -4JAV 8.3 ?
36 PsiBlast_CBE 81.6631% -81 - C3 -4JAV 7.4 ?
15 PsiBlast_PDB 80.9831% -85 - C3 -2C2A 7.0 ?
1 PsiBlast_PDB 79.2732% -74 - C3 -4U7N - ? -
21 PsiBlast_CBE 79.0032% -63 - C3 -4U7O 9.1 ?
2 PsiBlast_PDB 78.4532% -63 - C3 -4U7O 9.1 ?
9 PsiBlast_PDB 78.1832% -86 - C3 -4JAU 6.2 ?
8 PsiBlast_PDB 77.9132% -80 - C3 -4JAS 8.7 ?
13 PsiBlast_PDB 77.7031% -75 - C3 -3DGE 6.7 ?
38 Fugue 77.3226% -43 - C3 -4I5S - ? -
49 HHSearch 77.2832% -69 - C3 -2C2A 7.0 ?
37 PsiBlast_CBE 76.8631% -70 - C3 -3DGE 7.5 ?
48 HHSearch 76.7423% -82 - C3 -3A0R - ? -
3 PsiBlast_PDB 75.1528% -50 - C3 -4I5S - ? -
23 PsiBlast_CBE 69.0433% -47 - C3 -4BIU - CPXA_ECOLI -
16 PsiBlast_PDB 67.9630% -54 - C3 -4Q20 - DIVL_CAUCR -
4 PsiBlast_PDB 63.4833% -48 - C3 -4BIU - CPXA_ECOLI -
22 PsiBlast_CBE 62.7433% -32 - C3 -4BIU - CPXA_ECOLI -
6 PsiBlast_PDB 61.5233% -46 - C3 -4BIX - CPXA_ECOLI -
52 HHSearch 61.1519% -60 - C3 -2Q8G - PDK1_HUMAN -
58 HHSearch 55.1431% -67 - C3 -3SL2 7.5
17 PsiBlast_PDB 33.6943% -18 - C3 -3SL2 7.5