@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1950: (2015-12-12 )
MSRTVSKLVINNLDLYYGEFHALKDVNLDIEEKEITAFIGPSGCGKSTLLKSINRMNDLVKNCKITGDITLEGEDVYRQLDINQLRKKVGMVFQKPNPFPMSIYDNVAFGPRTHGIHSKAELDDIVERSLKQAALWDEVKDRLHKSALGMSGGQQQRLCIARALAIEPDVLLMDEPTSALDPISTAKIEELVIQLKKNYTIVIVTHNMQQAVRISDKTAFFLMGEVVEYNKTSQLFSLPQDERTENYITGRFG

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




ANP_A_2(4AYW)
ABCBA_HUMAN
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




92 PsiBlast_CBE 85.4536% -81 - C1 -1B0U 6.0 HISP_SALTY
110 Fugue 85.2236% -96 - C1 -1B0U 6.0 HISP_SALTY
2 PsiBlast_PDB 83.8135% -77 - C1 -4U02 - ? -
137 HHSearch 83.0635% -89 - C1 -1B0U - HISP_SALTY -
135 HHSearch 81.0836% -85 - C1 -2OLJ - ? -
23 PsiBlast_CBE 80.2335% -78 - C1 -4U02 - ? -
1 PsiBlast_PDB 80.1335% -80 - C1 -4U00 - ? -
3 PsiBlast_PDB 79.6236% -80 - C1 -2OLJ 6.1 ?
51 PsiBlast_CBE 78.5833% -80 - C1 -2AWN - MALK_ECOLI -
21 PsiBlast_CBE 78.4535% -75 - C1 -4U02 - ? -
27 PsiBlast_CBE 78.3436% -76 - C1 -2OUK - ? -
22 PsiBlast_CBE 78.2835% -79 - C1 -4U02 - ? -
5 PsiBlast_PDB 78.1236% -79 - C1 -2OUK - ? -
31 PsiBlast_CBE 77.9736% -80 - C1 -2OLK 6.2 ?
48 PsiBlast_CBE 77.1833% -84 - C1 -3PUV - MALK_ECOLI -
44 PsiBlast_CBE 76.9833% -84 - C1 -3PUX - MALK_ECOLI -
17 PsiBlast_PDB 76.7133% -93 - C1 -2AWN - MALK_ECOLI -
30 PsiBlast_CBE 76.6036% -75 - C1 -2OLK 6.2 ?
39 PsiBlast_CBE 76.4133% -85 - C1 -3RLF - MALK_ECOLI -
114 Fugue 76.1332% -85 - C1 -3TUZ - METN_ECOLI -
8 PsiBlast_PDB 76.0837% -75 - C1 -3C41 7.0 ?
4 PsiBlast_PDB 75.9636% -76 - C1 -2OLK 6.1 ?
6 PsiBlast_PDB 75.7736% -76 - C1 -2Q0H 5.5 ?
29 PsiBlast_CBE 75.7436% -78 - C1 -2OLK 6.1 ?
7 PsiBlast_PDB 75.6736% -77 - C1 -3C4J 6.7 ?
24 PsiBlast_CBE 75.5836% -86 - C1 -3C4J 5.4 ?
33 PsiBlast_CBE 75.3737% -78 - C1 -3C41 5.9 ?
11 PsiBlast_PDB 75.1535% -90 - C1 -4YMU 5.4 ?
12 PsiBlast_PDB 74.7035% -92 - C1 -4YMV 5.8 ?
61 PsiBlast_CBE 74.6833% -76 - C1 -4AYX 3.8 ABCBA_HUMAN
35 PsiBlast_CBE 74.6535% -90 - C1 -4YMU 5.7 ?
34 PsiBlast_CBE 74.6335% -88 - C1 -4YMV 4.8 ?
32 PsiBlast_CBE 73.6736% -80 - C1 -2OLJ 5.9 ?
25 PsiBlast_CBE 73.0536% -79 - C1 -2Q0H 5.7 ?
60 PsiBlast_CBE 72.7633% -78 - C1 -4AYW 3.7 ABCBA_HUMAN
62 PsiBlast_CBE 70.7533% -71 - C1 -4AYT 4.0 ABCBA_HUMAN
103 PsiBlast_CBE 62.9736% -78 - C1 -1L2T 5.3 Y796_METJA