@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs2005: (2015-12-12 )
MVKVSNLGYPRLGEQREWKQAIEAFWAGNLEQKDLEKQLKQLRINHLKKQKEAGIDLIPVGDFSCYDHVLDLSFQFNVIPKRFDEYERNLDLYFAIARGDKDNVASSMKKWFNTNYHYIVPEWEVETKPHLQNNYLLDLYLEAREVVGDKAKPVITGPITYVSLSSGIVDFEATVQRLLPLYKQVFQDLIDAGATYIQIDEPIFVTDEGELLVDIAKSVYDFFAREVPQAHFIFQTYFESAVCLDKLSKLPVTGFGLDFIHGRAENLAAVKQGLFREKELFAGIVNGRNIWAVNLEETLALLEEIGPFVKRLTLQPSSSLLHVPVTTKYETHLDPVLKNGLSFADEKLKELELLASAFDGNKTKGYHEALSRFSALQAADFRHVALESLAEVKLERSPYKLRQALQAEKLQLPILPTTTIGSFPQSPEIRKKRLAWKRGNLSDSDYKDFIKTEIRRWIAIQEDLDLDVLVHGEFERVDMVEFFGQKLAGFTTTKLGWVQSYGSRAVKPPIIYGDVKHIQPLSLEETVYAQSLTKKPVKGMLTGPITITNWSFERDDISRSDLFNQIALAIKDEIQLLEQSGIAIIQVDEAALREGLPLRQQKQQAYLDDAVAAFKIATSSVKDETQIHTHMCYSKFDEIIDSIRALDADVISIETSRSHGDIIESFETAVYPLGIGLGVYDIHSPRIPTKEEIIVNIQRSLKCLSKEQFWVNPDCGLKTRREAETIAALEVLVSATKEVRQQLDN

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

39S_A_6(4QQU)
METE_CANAL
[Raw transfer]



C2F_A_3(4L65)
METE_CANAL
[Raw transfer]



THG_A_9(1U22)
METE1_ARATH
[Raw transfer]



MTX_A_4(4L6H)
METE_CANAL
[Raw transfer]



C2F_A_9(1U1J)
METE1_ARATH
[Raw transfer]



HCS_A_3(4L6H)
METE_CANAL
[Raw transfer]



HCS_A_3(4L5Z)
METE_CANAL
[Raw transfer]



GLN_A_3(4L6O)
METE_CANAL
[Raw transfer]



MET_A_8(1U1J)
METE1_ARATH
[Raw transfer]



MET_A_8(1U1H)
METE1_ARATH
[Raw transfer]



HCS_A_8(1U22)
METE1_ARATH
[Raw transfer]
2 PsiBlast_PDB 98.5672% -86 - C2 -3T0C - METE_STRMU -
3 PsiBlast_PDB 98.2872% -90 - C2 -2NQ5 - METE_STRMU -
1 PsiBlast_PDB 98.2872% -87 - C2 -3L7R - METE_STRMU -
45 HHSearch 96.3172% -86 - C2 -2NQ5 - METE_STRMU -
9 PsiBlast_PDB 85.0344% -77 - C2 -1U1J 4.6 METE1_ARATH
8 PsiBlast_PDB 84.8244% -77 - C2 -1U1H 4.8 METE1_ARATH
5 PsiBlast_PDB 84.6442% -73 - C2 -1T7L - METE_THEMA -
46 HHSearch 84.4943% -78 * C2 *1T7L - METE_THEMA -
44 HHSearch 84.2545% -70 - C2 -1U1J 4.5 METE1_ARATH
16 PsiBlast_PDB 84.2042% -70 - C2 -4L6H 4.9 METE_CANAL
15 PsiBlast_PDB 84.1442% -70 - C2 -4L65 5.8 METE_CANAL
20 PsiBlast_PDB 84.1042% -74 - C2 -3PPC - METE_CANAL -
24 PsiBlast_CBE 83.9542% -72 - C2 -1T7L - METE_THEMA -
22 PsiBlast_CBE 83.9242% -73 - C2 -3BQ6 - METE_THEMA -
21 PsiBlast_CBE 83.8542% -73 - C2 -1XR2 - METE_THEMA -
7 PsiBlast_PDB 83.6942% -73 - C2 -3BQ6 - METE_THEMA -
23 PsiBlast_CBE 83.6242% -74 - C2 -3BQ5 - METE_THEMA -
10 PsiBlast_PDB 83.5944% -76 - C2 -1U1U - METE1_ARATH -
13 PsiBlast_PDB 83.5242% -69 - C2 -3PPG - METE_CANAL -
17 PsiBlast_PDB 83.4742% -72 - C2 -4L6O 2.9 METE_CANAL
14 PsiBlast_PDB 83.4542% -70 - C2 -4L5Z 5.0 METE_CANAL
11 PsiBlast_PDB 83.1144% -76 - C2 -1U22 5.5 METE1_ARATH
18 PsiBlast_PDB 83.0742% -62 - C2 -4QQU 8.4 METE_CANAL