@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs2031: (2015-12-12 )
MSLLELVNLHKTFEKGTVNENHVLRGLDLTIEDGDFISVIGGNGAGKSTLLNCIAGLIPIDQGAITLDNQSITKDSVEKRSKDISRVFQDPRMGTATNLTIEENMAIAHKRGNKRHIFRQSVTDDDRQLFKKSLSQLGLGLENRMKTDAAFLSGGQRQALTLAMATLVRPKLLLLDEHTAALDPKTSDMVMELTQKVIEEQRLTALMITHNMEHAIAYGNRLVMLYHGKIVVDVKGEAKRNLTVAELMELFHKNSGQQLIDDALVLG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_4(1G6H)
LIVG_METJA
[Raw transfer]




ADP_A_8(1G9X)
LIVG_METJA
[Raw transfer]




54 Fugue 84.6327%-104 - C1 -3TUZ - METN_ECOLI -
57 Fugue 83.7826% -86 - C1 -1Z47 - ? -
56 Fugue 82.1228% -82 - C1 -1OXS - ? -
23 PsiBlast_CBE 79.1031% -93 - C1 -3TIF - Y796_METJA -
16 PsiBlast_PDB 78.7631% -89 - C1 -1L2T - Y796_METJA -
22 PsiBlast_CBE 78.7231% -92 - C1 -1L2T - Y796_METJA -
17 PsiBlast_PDB 76.8031% -92 - C1 -3TIF - Y796_METJA -
45 HHSearch 76.5931% -98 - C1 -3D31 - ? -
53 HHSearch 75.7428% -92 * C1 *2PCJ - LOLD_AQUAE -
14 PsiBlast_PDB 73.6527% -89 - C1 -1GAJ - LIVG_METJA -
19 PsiBlast_PDB 73.4729%-108 - C1 -3TUZ - METN_ECOLI -
41 HHSearch 73.3330% -87 - C1 -1OXX - ? -
59 Fugue 72.7525% -87 - C1 -4F4C - PGP1_CAEEL -
9 PsiBlast_PDB 71.9428% -89 - C1 -1G6H 6.5 LIVG_METJA
40 HHSearch 71.6230%-101 - C1 -1V43 - ? -
37 HHSearch 71.5330% -96 - C1 -3TUI - METN_ECOLI -
20 PsiBlast_PDB 70.4432%-111 - C1 -1JI0 - ? -
10 PsiBlast_PDB 69.9128% -81 - C1 -1G9X 4.9 LIVG_METJA
51 HHSearch 68.7431%-104 - C1 -1JI0 - ? -
15 PsiBlast_PDB 68.0129%-105 - C1 -3DHW - METN_ECOLI -