@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs2053: (2015-12-12 )
MTQGTVKWFNSEKGFGFISSETGTDVFAHFSEIKVDGFKTLEEGQKVTFDIQDGQRGPQATNINLVK

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TRS_B_6(1C9O)
CSPB_BACCL
[Raw transfer]




TRS_A_7(1C9O)
CSPB_BACCL
[Raw transfer]




TRS_A_7(1C9O)
CSPB_BACCL
[Raw transfer]




CHAIN_S_4(3PF5)
CSPB_BACSU
[Raw transfer]

-

CHAIN_R_3(3PF4)
CSPB_BACSU
[Raw transfer]

-

CHAIN_R_3(3PF5)
CSPB_BACSU
[Raw transfer]

-

NACID_C_1(2HAX)
CSPB_BACCL
[Raw transfer]

-

NACID_D_2(2HAX)
CSPB_BACCL
[Raw transfer]

-

NACID_B_1(2ES2)
CSPB_BACSU
[Raw transfer]

-

1 PsiBlast_PDB 86.3668% -97 - C5 -2I5M - CSPB_BACSU -
5 PsiBlast_PDB 86.0563% -94 - C5 -1HZA - CSPB_BACCL -
3 PsiBlast_PDB 85.7663%-101 - C5 -1C9O 2.1 CSPB_BACCL
53 HHSearch 85.6861% -99 - C5 -1C9O 2.1 CSPB_BACCL
2 PsiBlast_PDB 85.4863% -94 - C5 -1I5F - CSPB_BACCL -
11 PsiBlast_PDB 84.9766% -90 - C5 -1CSP - CSPB_BACSU -
8 PsiBlast_PDB 84.7863% -97 - C5 -1HZC - CSPB_BACCL -
17 PsiBlast_PDB 84.7565% -96 - C5 -2I5L - CSPB_BACSU -
24 PsiBlast_CBE 84.7466% -98 - C5 -3PF5 7.0 CSPB_BACSU
16 PsiBlast_PDB 84.6366% -91 - C5 -3PF5 2.8 CSPB_BACSU
15 PsiBlast_PDB 84.2366% -92 - C5 -3PF4 - CSPB_BACSU -
25 PsiBlast_CBE 84.0866% -96 - C5 -3PF4 7.6 CSPB_BACSU
56 HHSearch 83.9956% -88 - C5 -3A0J - ? -
6 PsiBlast_PDB 83.8663% -95 - C5 -1HZB - CSPB_BACCL -
12 PsiBlast_PDB 83.8166% -81 - C5 -1CSQ - CSPB_BACSU -
23 PsiBlast_CBE 83.5363% -92 - C5 -1HZB - CSPB_BACCL -
20 PsiBlast_PDB 82.7856% -84 - C5 -3I2Z - ? -
14 PsiBlast_PDB 82.7766% -80 - C5 -1NMG - CSPB_BACSU -
55 HHSearch 82.4955% -81 - C5 -3I2Z - ? -
9 PsiBlast_PDB 82.4966% -97 - C5 -2ES2 9.7 CSPB_BACSU
22 PsiBlast_CBE 82.3163% -93 - C5 -1C9O 2.1 CSPB_BACCL
4 PsiBlast_PDB 73.8363% -95 - C5 -2HAX 12.8 CSPB_BACCL
21 PsiBlast_CBE 72.4763%-100 - C5 -2HAX 13.2 CSPB_BACCL