@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs2082: (2015-12-13 )
MLFQSKINYPKKSSIITQITLWYSSFIFILVIGVLIGSFFISKSIAENKSKKNLEAKAVQMSQALAKGHRYEAFEDGIFYSVYDQNGKVIYSGFPKGFKRDLDHQHKHKKKLSLFSMENRTFQYVDIPISGKNQWLRAIRTVDRLDKQLTELLFSLGIVLPLMLIIITVGGYLILKRTFRPIQEITETAQFITQNEDYTKRIITKNNENELTELAAVINTMLASIESSFVREKQFNNDVSHELRTPVTVILSESEYGKNYAENLSEAKESFEVIHRQSLSMKKLVEQLLELTKAENPLSIQLEPLNFSIMMKQLVSDSSRLLDNTPIHLDSQIEDDLWIIGQQTLLKRLFDNLFSNAIKFTNNHISISLRQSDNQIVFSIKDNGLGISVDDQSKIWNRFYQVDSARTKDSQSGIGLGLSLVKQIATIHRAKIWVDSKPDNGSQFTLTFPKLKKD

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AN2_B_4(4U7O)
?
[Raw transfer]




AN2_A_3(4U7O)
?
[Raw transfer]




ADP_A_8(4JAV)
?
[Raw transfer]




ADP_A_2(4JAU)
?
[Raw transfer]




5 PsiBlast_PDB 84.5629% -95 - C1 -4JAU 5.9 ?
4 PsiBlast_PDB 84.4329% -90 - C1 -4JAS - ? -
7 PsiBlast_PDB 83.9129% -83 - C1 -4JAV 7.9 ?
3 PsiBlast_PDB 83.8831% -78 - C1 -4U7O 9.1 ?
6 PsiBlast_PDB 83.1929% -84 - C1 -3DGE - ? -
8 PsiBlast_PDB 82.8929% -90 - C1 -2C2A - ? -
2 PsiBlast_PDB 82.0031% -81 - C1 -4U7N - ? -
21 PsiBlast_CBE 76.6231% -67 - C1 -4U7O 9.6 ?
12 PsiBlast_PDB 71.8721% -65 - C1 -4BIX - CPXA_ECOLI -
16 PsiBlast_PDB 71.5521% -60 - C1 -4BIV - CPXA_ECOLI -
11 PsiBlast_PDB 71.4721% -61 - C1 -4BIW - CPXA_ECOLI -
19 PsiBlast_PDB 70.5923% -83 - C1 -4CTI - ENVZ_ECOLI -
17 PsiBlast_PDB 70.2421% -58 - C1 -4CB0 - CPXA_ECOLI -
10 PsiBlast_PDB 70.1022% -64 - C1 -4BIU - CPXA_ECOLI -
13 PsiBlast_PDB 69.7121% -66 - C1 -4BIY - CPXA_ECOLI -
14 PsiBlast_PDB 69.1421% -63 - C1 -4BIZ - CPXA_ECOLI -
9 PsiBlast_PDB 67.0625% -71 - C1 -4Q20 - DIVL_CAUCR -
35 HHSearch 66.1329% -89 * C1 *3SL2 - -
32 HHSearch 64.7726% -83 - C1 -1YSR - PRRB_MYCTU -
25 HHSearch 63.1823% -76 - C1 -3A0R - ? -