@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs2101: (2015-12-13 )
MTHNFAENYDIIVVGAGHAGVEASLAASRMGCKTLLATINLEMLAFMPCNPSIGGSAKGIVVREIDALGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKALYAQTMKQTVEKQENLTLRQAMIDEILVEDGKVVGVRTATNQKFSAKSVVITTGTALRGEIILGDLKYSSGPNNSLASVTLADNLRDLGLEIGRFKTGTPPRVKASSINYEKTEIQPGDEQPNHFSFMSRDEDYITDQVPCWLTYTNTLSHDIINQNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRYTEEVYVQGLSTSLPEDVQVDLLRSIKGLENAEMMRTGYAIEYDIVLPHQLRATLETKVIAGLFTAGQTNGTSGYEEAAGQGLVAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTLEPYRLLTSRAEYRLILRHDNADMRLTEIGYEIGLVDEERYAIFKKRQMQFENELERLDSIKLKPVSETNKRIQELGFKPLTDALTAKEFMRRPQITYAVATDFVGCADEPLDSKVIELLETEIKYEGYIKKALDQVAKMKRMEEKRIPPHIDWDDIDSIATEARQKFKKINPETLGQASRISGVNPADISILMVYLEGRQKGRKNIN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_B_4(2ZXH)
MNMG_AQUAE
[Raw transfer]



FAD_A_3(2ZXH)
MNMG_AQUAE
[Raw transfer]
4 PsiBlast_PDB 92.3248% -68 - C1 -3CP8 - MNMG_CHLTE -
26 PsiBlast_CBE 92.0548% -70 - C1 -3CP8 - MNMG_CHLTE -
27 PsiBlast_CBE 91.7048% -67 - C1 -3CP8 - MNMG_CHLTE -
24 PsiBlast_CBE 90.5850% -60 - C1 -2ZXH 10.7 MNMG_AQUAE
113 HHSearch 90.5147% -65 - C1 -3CP8 - MNMG_CHLTE -
22 PsiBlast_CBE 90.2150% -59 - C1 -2ZXI - MNMG_AQUAE -
23 PsiBlast_CBE 90.0550% -59 - C1 -2ZXI - MNMG_AQUAE -
21 PsiBlast_CBE 90.0550% -61 - C1 -2ZXI - MNMG_AQUAE -
3 PsiBlast_PDB 89.2550% -58 - C1 -2ZXH 12.4 MNMG_AQUAE
25 PsiBlast_CBE 87.2048% -67 - C1 -3CP8 - MNMG_CHLTE -
2 PsiBlast_PDB 85.8948% -69 - C1 -3CES - MNMG_ECOLI -
28 PsiBlast_CBE 83.2350% -64 - C1 -3G05 - MNMG_ECO57 -
5 PsiBlast_PDB 82.4650% -66 - C1 -3G05 - MNMG_ECO57 -
1 PsiBlast_PDB 81.9048% -70 - C1 -3CP2 - MNMG_ECOLI -
111 HHSearch 57.1848% 27 - C1 -3CES - MNMG_ECOLI -
114 HHSearch 52.8925% -46 - C1 -3G5S - TRMFO_THET8 -
119 HHSearch 48.9427% -73 - C1 -2CUL - ? -
9 PsiBlast_PDB 47.2523% -65 - C1 -2CUL - ? -
15 PsiBlast_PDB 41.8040% -39 - C4 -2GB0 - MSOX_BACB0 -
108 Fugue 41.6219% -12 - C1 -4OPU - ? -