@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs2119: (2015-12-13 )
MNKKETRHQLIRSLVSETKVRTQHELRELLEKNGVSVTQATLSRDMKELNLIKVNESSDNATETYYEIHSISQKRWEERLRFYMEDALVMLFPVQNQIVLKTLPGLAQSFGSILDSILLPEILATVCGDDTCLIICNNSEEAQKCFEKLSQYTPPFFFSKK

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GGB_F_26(3LAP)
ARGR_MYCTU
[Raw transfer]




GGB_D_22(3LAP)
ARGR_MYCTU
[Raw transfer]




ARG_D_16(3LAJ)
ARGR_MYCTU
[Raw transfer]




GGB_F_26(3LAP)
ARGR_MYCTU
[Raw transfer]




GGB_E_25(3LAP)
ARGR_MYCTU
[Raw transfer]




ARG_E_17(3FHZ)
ARGR_MYCTU
[Raw transfer]




ARG_F_18(3LAJ)
ARGR_MYCTU
[Raw transfer]




ARG_D_16(3FHZ)
ARGR_MYCTU
[Raw transfer]




ARG_F_18(3FHZ)
ARGR_MYCTU
[Raw transfer]




ARG_C_15(3FHZ)
ARGR_MYCTU
[Raw transfer]




ARG_E_17(3LAJ)
ARGR_MYCTU
[Raw transfer]




ARG_B_4(2P5M)
ARGR_BACSU
[Raw transfer]




ARG_F_11(1B4B)
ARGR_GEOSE
[Raw transfer]




ARG_C_15(3FHZ)
ARGR_MYCTU
[Raw transfer]




ARG_F_11(1B4B)
ARGR_GEOSE
[Raw transfer]




ARG_F_18(3LAJ)
ARGR_MYCTU
[Raw transfer]




GGB_E_25(3LAP)
ARGR_MYCTU
[Raw transfer]




GGB_D_22(3LAP)
ARGR_MYCTU
[Raw transfer]




ARG_E_17(3FHZ)
ARGR_MYCTU
[Raw transfer]




GGB_F_26(3LAP)
ARGR_MYCTU
[Raw transfer]




ARG_E_17(3LAJ)
ARGR_MYCTU
[Raw transfer]




ARG_D_16(3LAJ)
ARGR_MYCTU
[Raw transfer]




ARG_F_18(3FHZ)
ARGR_MYCTU
[Raw transfer]




53 HHSearch 90.7638%-131 - C9 -1B4A - ARGR_GEOSE -
1 PsiBlast_PDB 86.2338%-126 - C9 -1F9N - ARGR_BACSU -
2 PsiBlast_PDB 84.7438%-133 - C9 -1B4A - ARGR_GEOSE -
21 PsiBlast_CBE 84.5433%-124 - C9 -3LAP 2.6 ARGR_MYCTU
34 PsiBlast_CBE 84.4333%-118 - C9 -3FHZ 2.9 ARGR_MYCTU
23 PsiBlast_CBE 84.1433%-122 - C9 -3LAP 2.6 ARGR_MYCTU
33 PsiBlast_CBE 84.1333%-117 * C9 *3FHZ 3.1 ARGR_MYCTU
35 PsiBlast_CBE 84.0433%-118 - C9 -3FHZ 2.7 ARGR_MYCTU
22 PsiBlast_CBE 84.0133%-125 - C9 -3LAP 2.6 ARGR_MYCTU
29 PsiBlast_CBE 83.8733%-116 - C9 -3LAJ 2.8 ARGR_MYCTU
25 PsiBlast_CBE 83.4433%-116 - C9 -3LAP 3.0 ARGR_MYCTU
31 PsiBlast_CBE 83.3533%-124 - C9 -3FHZ 3.9 ARGR_MYCTU
30 PsiBlast_CBE 83.2833%-118 - C9 -3LAJ 2.5 ARGR_MYCTU
55 HHSearch 83.2430%-130 - C9 -3LAP 3.3 ARGR_MYCTU
24 PsiBlast_CBE 83.2033%-118 - C9 -3LAP 3.3 ARGR_MYCTU
32 PsiBlast_CBE 83.1433%-124 - C9 -3FHZ 3.4 ARGR_MYCTU
27 PsiBlast_CBE 83.1233%-121 - C9 -3LAJ 2.3 ARGR_MYCTU
4 PsiBlast_PDB 83.0933%-123 - C9 -3FHZ 2.8 ARGR_MYCTU
5 PsiBlast_PDB 83.0633%-118 - C9 -3LAJ 2.8 ARGR_MYCTU
26 PsiBlast_CBE 82.6733%-123 - C9 -3LAJ 2.4 ARGR_MYCTU
28 PsiBlast_CBE 82.6133%-123 - C9 -3LAJ 3.1 ARGR_MYCTU
6 PsiBlast_PDB 82.4733%-116 - C9 -3LAP 3.3 ARGR_MYCTU
56 HHSearch 68.1137%-154 - C9 -2P5M 3.8 ARGR_BACSU
74 Fugue 62.5341%-161 - C9 -1B4B 2.8 ARGR_GEOSE
59 HHSearch 61.4041%-157 - C9 -1B4B 2.8 ARGR_GEOSE