@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs2127: (2015-12-13 )
MTKPIILTGDRPTGKLHIGHYVGSLKNRVLLQNEGSYTLFVFLADQQALTDHAKDPQTIVESIGNVALDYLAVGLDPNKSTLFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEIAQKGFGESIPAGFLVYPVAQAADITAFKANLVPVGTDQKPMIEQTREIVRSFNHAYNCQVLVEPEGIYPENDAAGRLPGLDGNAKMSKSLNNGIFLADDMDTVKKKVMSMYTDPNHIKVEEPGQIEGNMVFHYLDVFGRDEDQKEITAMKEHYQKGGLGDVKTKRYLLDILERELSPIRERRLEYAKDMGQVYQMLQKGSEKAQAVAASTLDEVKSAMGLNYFK

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_5(1YID)
SYW2_DEIRA
[Raw transfer]



TRP_E_5(2A4M)
SYW2_DEIRA
[Raw transfer]



TRP_E_5(1YI8)
SYW2_DEIRA
[Raw transfer]



HRP_E_5(1YIA)
SYW2_DEIRA
[Raw transfer]



ADP_A_3(3TZL)
SYW_CAMJE
[Raw transfer]



GOL_A_3(3N9I)
SYW_YERPE
[Raw transfer]



TRP_A_3(2G36)
SYW_THEMA
[Raw transfer]



TRP_A_3(2G36)
SYW_THEMA
[Raw transfer]



TRP_A_4(3TZL)
SYW_CAMJE
[Raw transfer]



TRP_A_2(3SZ3)
SYW_VIBCH
[Raw transfer]
38 HHSearch 95.1655% -81 - C3 -1YI8 - SYW2_DEIRA -
1 PsiBlast_PDB 94.4156% -78 - C3 -2A4M - SYW2_DEIRA -
21 PsiBlast_CBE 94.1556% -78 - C3 -2A4M 3.5 SYW2_DEIRA
2 PsiBlast_PDB 93.4156% -79 - C3 -1YI8 - SYW2_DEIRA -
22 PsiBlast_CBE 93.0156% -79 - C3 -1YI8 2.6 SYW2_DEIRA
4 PsiBlast_PDB 92.2656% -77 - C3 -1YID 4.7 SYW2_DEIRA
3 PsiBlast_PDB 91.7256% -80 - C3 -1YIA 2.8 SYW2_DEIRA
6 PsiBlast_PDB 83.5140% -90 - C3 -2EL7 - ? -
39 HHSearch 81.7440% -85 - C3 -2EL7 - ? -
5 PsiBlast_PDB 81.5841% -73 - C3 -2G36 3.8 SYW_THEMA
40 HHSearch 80.9542% -76 - C3 -2G36 3.8 SYW_THEMA
23 PsiBlast_CBE 74.4034% -83 - C3 -3FHJ - SYW_GEOSE -
19 PsiBlast_PDB 74.2031% -79 - C3 -3M5W - SYW_CAMJE -
15 PsiBlast_PDB 73.9633% -91 - C3 -3FI0 - SYW_GEOSE -
26 PsiBlast_CBE 73.5034% -74 - C3 -1MB2 - SYW_GEOSE -
30 PsiBlast_CBE 73.2234% -74 - C3 -1MAW - SYW_GEOSE -
34 PsiBlast_CBE 72.9734% -73 - C3 -1MAW - SYW_GEOSE -
24 PsiBlast_CBE 72.9534% -81 - C3 -3FHJ - SYW_GEOSE -
11 PsiBlast_PDB 72.6834% -73 - C3 -1MB2 - SYW_GEOSE -
32 PsiBlast_CBE 72.5134% -73 - C3 -1MAW - SYW_GEOSE -
20 PsiBlast_PDB 69.6031% -74 - C3 -3TZL 5.2 SYW_CAMJE
44 HHSearch 68.5231% -78 - C3 -3TZL 4.6 SYW_CAMJE
45 HHSearch 67.9632% -68 - C3 -3N9I 2.9 SYW_YERPE
41 HHSearch 67.3930% -67 - C3 -3SZ3 3.6 SYW_VIBCH