@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu00190: (2016-06-01 )
MSYQALYRVFRPQRFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTGKTSAAKIFAKAVNCEHAPVDEPCNECAACKGITNGSISDVIEIDAASNNGVDEIRDIRDKVKFAPSAVTYKVYIIDEVHMLSIGAFNALLKTLEEPPEHCIFILATTEPHKIPLTIISRCQRFDFKRITSQAIVGRMNKIVDAEQLQVEEGSLEIIASAADGGMRDALSLLDQAISFSGDILKVEDALLITGAVSQLYIGKLAKSLHDKNVSDALETLNELLQQGKDPAKLIEDMIFYFRDMLLYKTAPGLEGVLEKVKVDETFRELSEQIPAQALYEMIDILNKSHQEMKWTNHPRIFFEVAVVKICQTSHQSAADLPEVDMLMKKIQQLEQEVERLKTTGIKAAAESPKKEAPRVPKGGKSNYKAPVGRIHEILKEATRPDLDLLRNSWGKLLAHLKQQNKVSHAALLNDSEPVAAGSAAFVLKFKYEIHCKMVAEDNNGVRTNLEQILESMLGKRMDLIGVPEAQWGKIREEFLEDHQQENEGSNEPAEEDPLIAEAKKLVGADLIEIKD

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AGS_A_6(1NJF)
DPO3X_ECOLI
[Raw transfer]




AGS_B_8(1NJF)
DPO3X_ECOLI
[Raw transfer]




AGS_D_12(1NJF)
DPO3X_ECOLI
[Raw transfer]




NACID_M_13(3GLI)
DPO3X_ECOLI
[Raw transfer]

-

NACID_M_13(3GLF)
DPO3X_ECOLI
[Raw transfer]

-

NACID_K_11(3GLF)
DPO3X_ECOLI
[Raw transfer]

-

NACID_K_11(3GLI)
DPO3X_ECOLI
[Raw transfer]

-

NACID_M_13(3GLG)
DPO3X_ECOLI
[Raw transfer]

-

NACID_K_11(3GLG)
DPO3X_ECOLI
[Raw transfer]

-

NACID_K_11(3GLI)
DPO3X_ECOLI
[Raw transfer]

-

NACID_M_13(3GLI)
DPO3X_ECOLI
[Raw transfer]

-

NACID_M_13(3GLG)
DPO3X_ECOLI
[Raw transfer]

-

NACID_M_13(3GLF)
DPO3X_ECOLI
[Raw transfer]

-

NACID_K_11(3GLF)
DPO3X_ECOLI
[Raw transfer]

-

NACID_K_11(3GLG)
DPO3X_ECOLI
[Raw transfer]

-

NACID_M_13(3GLF)
DPO3X_ECOLI
[Raw transfer]

-

NACID_M_13(3GLI)
DPO3X_ECOLI
[Raw transfer]

-

NACID_K_11(3GLG)
DPO3X_ECOLI
[Raw transfer]

-

NACID_K_11(3GLF)
DPO3X_ECOLI
[Raw transfer]

-

NACID_M_13(3GLG)
DPO3X_ECOLI
[Raw transfer]

-

NACID_K_11(3GLI)
DPO3X_ECOLI
[Raw transfer]

-

35 PsiBlast_CBE 93.6838%-103 - C1 -3GLF 3.5 DPO3X_ECOLI
36 PsiBlast_CBE 93.6138%-100 - C1 -3GLF 2.3 DPO3X_ECOLI
3 PsiBlast_PDB 92.5938%-102 - C1 -3GLF 2.2 DPO3X_ECOLI
44 PsiBlast_CBE 92.2638% -97 - C1 -3GLG 2.5 DPO3X_ECOLI
33 PsiBlast_CBE 92.2238% -99 - C1 -3GLF 2.4 DPO3X_ECOLI
34 PsiBlast_CBE 92.0638% -97 - C1 -3GLF 2.5 DPO3X_ECOLI
43 PsiBlast_CBE 91.9338% -99 - C1 -3GLG 2.1 DPO3X_ECOLI
45 PsiBlast_CBE 91.9138%-101 - C1 -3GLG 3.5 DPO3X_ECOLI
47 PsiBlast_CBE 91.7238% -96 - C1 -3GLG 2.1 DPO3X_ECOLI
7 PsiBlast_PDB 91.7038%-102 - C1 -3GLG 2.4 DPO3X_ECOLI
70 HHSearch 91.6738%-101 - C1 -1JR3 - DPO3X_ECOLI -
31 PsiBlast_CBE 91.6538% -97 - C1 -3GLI 3.6 DPO3X_ECOLI
28 PsiBlast_CBE 91.4238% -97 - C1 -3GLI 4.0 DPO3X_ECOLI
46 PsiBlast_CBE 91.2738% -99 - C1 -3GLG 2.1 DPO3X_ECOLI
60 Fugue 91.1237%-101 - C1 -1JR3 - DPO3X_ECOLI -
22 PsiBlast_CBE 90.9038% -99 - C1 -1XXH - DPO3X_ECOLI -
5 PsiBlast_PDB 90.9038%-106 - C1 -3GLH - DPO3X_ECOLI -
25 PsiBlast_CBE 90.6938% -96 - C1 -1XXH - DPO3X_ECOLI -
29 PsiBlast_CBE 90.5538% -96 - C1 -3GLI 4.1 DPO3X_ECOLI
26 PsiBlast_CBE 90.3638%-103 - C1 -1JR3 - DPO3X_ECOLI -
30 PsiBlast_CBE 89.9838%-101 - C1 -3GLI 4.2 DPO3X_ECOLI
37 PsiBlast_CBE 89.9738% -98 - C1 -3GLF 2.2 DPO3X_ECOLI
4 PsiBlast_PDB 89.8838%-102 - C1 -3GLI 2.1 DPO3X_ECOLI
32 PsiBlast_CBE 89.2338% -96 - C1 -3GLI 4.0 DPO3X_ECOLI
9 PsiBlast_PDB 77.3453%-102 - C1 -1NJF Error DPO3X_ECOLI
50 PsiBlast_CBE 75.8653% -97 - C1 -1NJF Error DPO3X_ECOLI
51 PsiBlast_CBE 75.6953%-100 - C1 -1NJF Error DPO3X_ECOLI