@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu00460: (2016-06-01 )
MRILEKAPAKINLSLDVTRKRPDGYHEVEMIMTTIDLADRIELTELAEDEVRVSSHNRFVPDDQRNLAYQAAKLIKDRYNVKKGVSIMITKVIPVAAGLAGGSSDAAATLRGLNRLWNLNLSAETLAELGAEIGSDVSFCVYGGTALATGRGEKIKHISTPPHCWVILAKPTIGVSTAEVYRALKLDGIEHPDVQGMIEAIEEKSFQKMCSRLGNVLESVTLDMHPEVAMIKNQMKRFGADAVLMSGSGPTVFGLVQYESKVQRIYNGLRGFCDQVYAVRMIGEQNALD

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CDM_A_3(2V2Z)
ISPE_AQUAE
[Raw transfer]




CDM_B_8(2V2Z)
ISPE_AQUAE
[Raw transfer]




CDM_A_2(3PYE)
ISPE_MYCTU
[Raw transfer]




CTN_B_10(2V34)
ISPE_AQUAE
[Raw transfer]




NVG_A_8(2V2Q)
ISPE_AQUAE
[Raw transfer]




CTN_A_3(2V34)
ISPE_AQUAE
[Raw transfer]




GVS_B_9(2VF3)
ISPE_AQUAE
[Raw transfer]




V12_A_11(2V2V)
ISPE_AQUAE
[Raw transfer]




GVS_A_3(2VF3)
ISPE_AQUAE
[Raw transfer]




GOL_B_15(2V2V)
ISPE_AQUAE
[Raw transfer]




C5P_A_2(4EMD)
?
[Raw transfer]




V12_B_20(2V2V)
ISPE_AQUAE
[Raw transfer]




GOL_A_2(3PYD)
ISPE_MYCTU
[Raw transfer]




GOL_B_14(2V2Q)
ISPE_AQUAE
[Raw transfer]




ATP_A_3(4DXL)
?
[Raw transfer]




ATP_A_2(4ED4)
?
[Raw transfer]




ADP_B_9(2V8P)
ISPE_AQUAE
[Raw transfer]




ADP_A_4(2V8P)
ISPE_AQUAE
[Raw transfer]




ANP_A_2(3PYF)
ISPE_MYCTU
[Raw transfer]




ANP_A_2(3PYF)
ISPE_MYCTU
[Raw transfer]




ADP_A_2(3PYG)
ISPE_MYCTU
[Raw transfer]




5 PsiBlast_PDB 95.3735% -84 - C1 -3PYE 4.2 ISPE_MYCTU
7 PsiBlast_PDB 95.0935% -83 - C1 -3PYG 3.9 ISPE_MYCTU
6 PsiBlast_PDB 94.9235% -83 - C1 -3PYF 4.6 ISPE_MYCTU
4 PsiBlast_PDB 93.8935% -82 - C1 -3PYD 1.9 ISPE_MYCTU
38 HHSearch 93.5433% -88 - C1 -3PYF 4.6 ISPE_MYCTU
8 PsiBlast_PDB 89.5737% -85 - C1 -1UEK - ISPE_THET8 -
61 Fugue 89.0734% -81 - C1 -1UEK - ISPE_THET8 -
3 PsiBlast_PDB 86.8235% -73 - C1 -4EMD 5.5 ?
1 PsiBlast_PDB 86.4735% -72 - C1 -4DXL 6.4 ?
65 Fugue 86.3124% -93 - C1 -1H74 - KHSE_METJA -
2 PsiBlast_PDB 86.0935% -74 - C1 -4ED4 6.5 ?
64 Fugue 85.4124% -90 - C1 -1FWK - KHSE_METJA -
63 Fugue 85.0524% -91 - C1 -1H72 - KHSE_METJA -
39 HHSearch 85.0033% -89 - C1 -1UEK - ISPE_THET8 -
41 HHSearch 84.9627% -85 - C1 -2WW4 - ISPE_ECOLI -
43 HHSearch 83.3723% -92 * C1 *1H72 - KHSE_METJA -
17 PsiBlast_PDB 82.6627% -80 - C1 -4RPF - KHSE_YERPN -
15 PsiBlast_PDB 82.1330% -77 - C1 -2WW4 - ISPE_ECOLI -
45 HHSearch 81.4522% -85 - C1 -4RPF - KHSE_YERPN -
66 Fugue 80.6524% -88 - C1 -1H72 - KHSE_METJA -
14 PsiBlast_PDB 79.8831% -80 - C1 -2VF3 5.4 ISPE_AQUAE
12 PsiBlast_PDB 79.2631% -80 - C1 -2V34 4.9 ISPE_AQUAE
23 PsiBlast_CBE 79.1731% -78 - C1 -2V34 5.0 ISPE_AQUAE
26 PsiBlast_CBE 78.8331% -80 - C1 -2V2Q 3.0 ISPE_AQUAE
22 PsiBlast_CBE 78.7431% -79 - C1 -2V8P 5.6 ISPE_AQUAE
21 PsiBlast_CBE 78.5931% -79 - C1 -2VF3 4.7 ISPE_AQUAE
9 PsiBlast_PDB 78.3631% -80 - C1 -2V2Q 6.4 ISPE_AQUAE
13 PsiBlast_PDB 78.0231% -77 - C1 -2V8P 5.2 ISPE_AQUAE
24 PsiBlast_CBE 77.9931% -79 - C1 -2V2Z 8.1 ISPE_AQUAE
11 PsiBlast_PDB 77.9331% -80 - C1 -2V2Z 8.6 ISPE_AQUAE
10 PsiBlast_PDB 77.4931% -79 - C1 -2V2V 6.5 ISPE_AQUAE
25 PsiBlast_CBE 77.1931% -78 - C1 -2V2V 5.6 ISPE_AQUAE