@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu00500: (2016-06-01 )
MDKRFAVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVVDEALKLSLSKLVTIVGHGAEEVKKQLGDKSEYRVQAKQLGTAHAVKQAQPFLADEKGVTIVICGDTPLLTAETMEQMLKEHTQREAKRTILTAVAEDPTGYGRIIRSENGAVQKIVEHKDASEEERLVTEINTGTYCFDNEALFRAIDQVSNDNAQGEYYLPDVIEILKNEGETVAAYQTGNFQETLGVNDRVALSQAEQFMKERINKRHMQNGVTLIDPMNTYISPDAVIGSDTVIYPGTVIKGEVQIGEDTIIGPHTEIMNSAIGSRTVIKQSVVNHSKVGNDVNIGPFAHIRPDSVIGNEVKIGNFVEIKKTQFGDRSKASHLSYVGDAEVGTDVNLGCGSITVNYDGKNKYLTKIEDGAFIGCNSNLVAPVTVGEGAYVAAGSTVTEDVPGKALAIARARQVNKDDYVKNIHKK

Atome Classification :

(49 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UD1_A_7(4G3P)
?
[Raw transfer]




UD1_B_14(2OI6)
GLMU_ECOLI
[Raw transfer]




UD1_B_14(2OI5)
GLMU_ECOLI
[Raw transfer]




UD1_A_4(3DJ4)
GLMU_MYCTU
[Raw transfer]




UD1_A_13(1HM9)
GLMU_STRPN
[Raw transfer]




UD1_B_11(1HV9)
GLMU_ECOLI
[Raw transfer]




UD1_A_2(3D8V)
GLMU_MYCTU
[Raw transfer]




UD1_A_7(4G3Q)
GLMU_MYCTU
[Raw transfer]




UD1_B_14(1HM9)
GLMU_STRPN
[Raw transfer]




UD1_B_13(2OI7)
GLMU_ECOLI
[Raw transfer]




UD1_A_4(1G97)
GLMU_STRPN
[Raw transfer]




UD1_A_13(1HM9)
GLMU_STRPN
[Raw transfer]




UD1_A_4(1G97)
GLMU_STRPN
[Raw transfer]




UD1_A_13(1HM9)
GLMU_STRPN
[Raw transfer]




UD1_A_7(4G3Q)
GLMU_MYCTU
[Raw transfer]




UD1_A_6(4G87)
GLMU_MYCTU
[Raw transfer]




UD1_A_2(4G3S)
GLMU_MYCTU
[Raw transfer]




UD1_V_22(1FWY)
GLMU_ECOLI
[Raw transfer]




1SG_A_12(4KQL)
GLMU_HAEIN
[Raw transfer]




UD1_A_8(3ST8)
GLMU_MYCTU
[Raw transfer]




UD1_S_19(1FWY)
GLMU_ECOLI
[Raw transfer]




UD1_A_13(2OI6)
GLMU_ECOLI
[Raw transfer]




UD1_A_13(2OI5)
GLMU_ECOLI
[Raw transfer]




UD1_A_12(2OI7)
GLMU_ECOLI
[Raw transfer]




UD1_A_6(3SPT)
GLMU_MYCTU
[Raw transfer]




UD1_A_10(1HV9)
GLMU_ECOLI
[Raw transfer]




UD1_A_10(1HV9)
GLMU_ECOLI
[Raw transfer]




1SE_A_12(4KPX)
GLMU_HAEIN
[Raw transfer]




1S8_A_2(4KNR)
GLMU_HAEIN
[Raw transfer]




ATP_A_2(4K6R)
GLMU_MYCTO
[Raw transfer]




0N5_A_6(4E1K)
GLMU_HAEIN
[Raw transfer]




1S9_A_2(4KNX)
GLMU_HAEIN
[Raw transfer]




UDP_A_2(2V0K)
GLMU_HAEIN
[Raw transfer]




1SF_A_2(4KPZ)
GLMU_HAEIN
[Raw transfer]




H2U_A_2(2V0J)
GLMU_HAEIN
[Raw transfer]




MES_M_13(1FXJ)
GLMU_ECOLI
[Raw transfer]




MES_M_13(1FXJ)
GLMU_ECOLI
[Raw transfer]




POP_A_7(4G87)
GLMU_MYCTU
[Raw transfer]




POP_A_4(4G3S)
GLMU_MYCTU
[Raw transfer]




GN1_A_3(4HCQ)
GLMU_MYCTU
[Raw transfer]




GN1_A_2(2QKX)
GLMU_MYCTU
[Raw transfer]




EDO_Y_25(1FWY)
GLMU_ECOLI
[Raw transfer]




1 PsiBlast_PDB 95.8050% -98 - C1 -4AAW - GLMU_STRR6 -
89 Fugue 95.1449% -90 - C1 -1HM9 8.2 GLMU_STRPN
2 PsiBlast_PDB 95.0350% -98 - C1 -4AC3 - GLMU_STRR6 -
5 PsiBlast_PDB 94.9350% -99 - C1 -1HM0 - GLMU_STRPN -
22 PsiBlast_CBE 94.9250% -96 - C1 -1HM8 - GLMU_STRPN -
3 PsiBlast_PDB 94.9150% -93 - C1 -1HM9 8.2 GLMU_STRPN
4 PsiBlast_PDB 94.8150% -97 - C1 -1HM8 - GLMU_STRPN -
21 PsiBlast_CBE 94.7450% -92 - C1 -1HM9 8.2 GLMU_STRPN
23 PsiBlast_CBE 94.1950% -99 - C1 -1HM0 - GLMU_STRPN -
7 PsiBlast_PDB 94.1250% -95 - C1 -1G97 8.7 GLMU_STRPN
6 PsiBlast_PDB 91.6150% -97 - C1 -1G95 - GLMU_STRPN -
68 HHSearch 90.3347% -89 - C1 -1HM9 7.3 GLMU_STRPN
32 PsiBlast_CBE 87.9341% -92 - C1 -4KQL 6.8 GLMU_HAEIN
13 PsiBlast_PDB 87.7942% -87 - C1 -2OI7 6.1 GLMU_ECOLI
66 HHSearch 87.6441% -91 - C1 -2V0H - GLMU_HAEIN -
40 PsiBlast_CBE 87.5941% -93 - C1 -2VD4 - GLMU_HAEIN -
45 PsiBlast_CBE 87.4941% -93 - C1 -2V0H - GLMU_HAEIN -
36 PsiBlast_CBE 87.1041% -93 - C1 -4KNR 6.5 GLMU_HAEIN
37 PsiBlast_CBE 86.9541% -95 - C1 -4E1K 5.5 GLMU_HAEIN
35 PsiBlast_CBE 86.9141% -93 - C1 -4KNX 5.6 GLMU_HAEIN
33 PsiBlast_CBE 86.8741% -92 - C1 -4KPZ 4.9 GLMU_HAEIN
65 HHSearch 86.8439% -91 * C1 *4G3Q 6.4 GLMU_MYCTU
34 PsiBlast_CBE 86.6841% -91 - C1 -4KPX 5.5 GLMU_HAEIN
43 PsiBlast_CBE 86.5541% -93 - C1 -2V0J 3.1 GLMU_HAEIN
25 PsiBlast_CBE 86.5542% -86 - C1 -2OI6 8.0 GLMU_ECOLI
42 PsiBlast_CBE 86.3441% -92 - C1 -2V0K 3.4 GLMU_HAEIN
12 PsiBlast_PDB 86.3442% -86 - C1 -2OI6 6.0 GLMU_ECOLI
27 PsiBlast_CBE 86.3242% -83 - C1 -1HV9 7.8 GLMU_ECOLI
26 PsiBlast_CBE 86.1442% -86 - C1 -2OI5 7.6 GLMU_ECOLI
10 PsiBlast_PDB 85.6742% -86 - C1 -1HV9 5.9 GLMU_ECOLI
11 PsiBlast_PDB 85.4442% -87 - C1 -2OI5 6.3 GLMU_ECOLI
90 Fugue 85.3442% -83 - C1 -1HV9 5.9 GLMU_ECOLI
30 PsiBlast_CBE 84.9639% -89 - C1 -4G3Q 6.4 GLMU_MYCTU
20 PsiBlast_PDB 84.9139% -89 - C1 -4HCQ 3.2 GLMU_MYCTU
28 PsiBlast_CBE 84.8639% -86 - C1 -4K6R 6.7 GLMU_MYCTO
29 PsiBlast_CBE 84.3439% -89 - C1 -4G3S 6.0 GLMU_MYCTU
24 PsiBlast_CBE 83.8542% -83 - C1 -2OI7 7.3 GLMU_ECOLI
31 PsiBlast_CBE 83.6239% -92 - C1 -4G3P 7.0 ?
19 PsiBlast_PDB 83.5039% -90 - C1 -4G87 6.4 GLMU_MYCTU
18 PsiBlast_PDB 83.4139% -88 - C1 -3ST8 5.2 GLMU_MYCTU
17 PsiBlast_PDB 82.1939% -86 - C1 -3SPT 5.0 GLMU_MYCTU
14 PsiBlast_PDB 82.1239% -86 - C1 -3D8V 5.2 GLMU_MYCTU
16 PsiBlast_PDB 81.4639% -86 - C1 -3DJ4 6.6 GLMU_MYCTU
46 PsiBlast_CBE 74.7739% -85 - C1 -2QKX 3.0 GLMU_MYCTU
50 PsiBlast_CBE 71.1339% -93 - C1 -1FWY 5.6 GLMU_ECOLI
92 Fugue 70.0638% -90 - C1 -1FXJ 2.8 GLMU_ECOLI
48 PsiBlast_CBE 70.0239% -93 - C1 -1FXJ 2.8 GLMU_ECOLI
49 PsiBlast_CBE 69.6739% -90 - C1 -1FWY 5.6 GLMU_ECOLI
91 Fugue 66.4851% -86 - C1 -1G97 8.6 GLMU_STRPN