@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu00740: (2016-06-02 )
MAQRRPAGKKIPFQKDSFLQQFEKLAQSRKHHVLLESARGGRYSIAGLDPIATVKGKDGITTIKHGDEMLFKEGDPLRAFHSWFKTLETETNHEFPDFQGGAIGFLSYDYARYIENFKMLSLDDLETPDIYFLVFDDIAVYDHQEESLWLITHVNGSDQETADVKLSELEQMWLTELPAVTSREMKPETAGSFAAPFTEDGFSQAVEKIKQYIASGDVFQVNLSIRQSQSLSVHPYQIYKTLREVNPSPYMAYLETPDFQIICGSPELLVSKKGKLLETRPIAGTRSRGKTNEEDEALANELIHNEKERAEHVMLVDLERNDLGRVSRYGSVRVNEFMAIEKYSHVMHIVSNVQGELQDGYDAVDIIHAVFPGGTITGAPKVRTMEIIEELEPTRRGLYTGSIGWFGYNHDLQFNIVIRTIYATGGQAFMQSGAGVVIDSVPKHEYKESFKKAFAMQRALELSEEETKIR

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

0GA_A_5(5CWA)
TRPE_MYCTO
[Raw transfer]




FMT_E_5(1K0E)
PABB_ECOLI
[Raw transfer]




FMT_E_5(1K0E)
PABB_ECOLI
[Raw transfer]




FMT_E_5(1K0E)
PABB_ECOLI
[Raw transfer]




VAE_A_3(3RV6)
MBTI_MYCTU
[Raw transfer]




15P_A_5(4GRH)
?
[Raw transfer]




BEZ_A_4(3R75)
?
[Raw transfer]




PYR_B_5(2FN1)
?
[Raw transfer]




PYR_A_7(2FN1)
?
[Raw transfer]




SAL_A_8(2FN1)
?
[Raw transfer]




SAL_B_6(2FN1)
?
[Raw transfer]




1 PsiBlast_PDB 97.4339% -72 - C1 -5CWA 3.4 TRPE_MYCTO
31 HHSearch 86.5432% -59 - C1 -1I1Q - TRPE_SALTY -
29 HHSearch 85.3638% -75 - C- -1QDL - TRPE_SULSO -
30 HHSearch 84.4936% -67 - C1 -4GRH 2.1 ?
28 HHSearch 83.7233% -71 * C1 *1K0E 2.9 PABB_ECOLI
42 Fugue 83.6632% -64 - C1 -1K0E 2.9 PABB_ECOLI
2 PsiBlast_PDB 82.8333% -78 - C1 -1K0E 2.9 PABB_ECOLI
46 Fugue 81.9029% -56 - C1 -1I1Q - TRPE_SALTY -
3 PsiBlast_PDB 81.8933% -82 - C1 -1K0G - PABB_ECOLI -
21 PsiBlast_CBE 81.0933% -80 - C1 -1K0G - PABB_ECOLI -
4 PsiBlast_PDB 79.8537% -79 - C1 -1QDL - TRPE_SULSO -
22 PsiBlast_CBE 79.3933% -83 - C1 -1K0E - PABB_ECOLI -
23 PsiBlast_CBE 75.5435% -66 - C1 -1I7S - TRPE_SERMA -
7 PsiBlast_PDB 75.2235% -67 - C1 -1I7S - TRPE_SERMA -
24 PsiBlast_CBE 74.3735% -64 - C1 -1I7Q - TRPE_SERMA -
5 PsiBlast_PDB 74.3736% -68 - C1 -1I1Q - TRPE_SALTY -
6 PsiBlast_PDB 72.8735% -62 - C1 -1I7Q - TRPE_SERMA -
32 HHSearch 71.0822% -58 - C1 -3LOG - MBTI_MYCTU -
34 HHSearch 69.2821% -60 - C1 -2FN0 - ? -
37 HHSearch 68.9623% -76 - C1 -3OS6 - ? -
25 PsiBlast_CBE 33.1734% -27 - C1 -2FN1 3.3 ?
10 PsiBlast_PDB 32.0534% -26 - C1 -2FN1 3.9 ?