@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu00810: (2016-06-02 )
MFKIGDIQLKNRVVLAPMAGVCNSAFRLTVKEFGAGLVCAEMVSDKAILYNNARTMGMLYIDEREKPLSLQIFGGKKETLVEAAKFVDQNTTADIIDINMGCPVPKITKCDAGAKWLLDPDKIYEMVSAVVDAVNKPVTVKMRMGWDEDHIFAVKNAQAVERAGGKAVALHGRTRVQMYEGTANWDIIKEVKQSVSIPVIGNGDVKTPQDAKRMLDETGVDGVMIGRAALGNPWMIYRTVQYLETGKLKEEPQVREKMAVCKLHLDRLIDLKGENVAVREMRKHAAWYLKGVKGNANVRNEINHCETREEFVQLLDAFTVEVEAKELQNAKVG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_A_3(4YCP)
DUSC_ECOLI
[Raw transfer]




FMN_A_3(4BFA)
DUSC_ECOLI
[Raw transfer]




FMN_A_5(1VHN)
?
[Raw transfer]




FMN_A_2(4BF9)
DUSC_ECOLI
[Raw transfer]




FMN_A_2(3W9Z)
DUSC_ECOLI
[Raw transfer]




FMN_A_5(1VHN)
?
[Raw transfer]




FMN_B_7(4BFA)
DUSC_ECOLI
[Raw transfer]




FMN_A_5(1VHN)
?
[Raw transfer]




87 HHSearch 94.1336% -92 - C1 -1VHN 8.6 ?
1 PsiBlast_PDB 93.1335% -91 - C1 -1VHN 8.6 ?
107 Fugue 86.1933% -92 - C1 -1VHN 7.2 ?
89 HHSearch 81.4326%-100 - C1 -3B0P - DUSAL_THET8 -
108 Fugue 79.8727% -82 - C1 -4BFA - DUSC_ECOLI -
3 PsiBlast_PDB 78.7134%-111 - C1 -4BFA 10.1 DUSC_ECOLI
109 Fugue 77.2626% -89 - C1 -3B0P - DUSAL_THET8 -
22 PsiBlast_CBE 77.0033%-108 - C1 -4YCO - DUSC_ECOLI -
21 PsiBlast_CBE 76.1834%-112 - C1 -4BFA 10.0 DUSC_ECOLI
2 PsiBlast_PDB 76.1834%-111 - C1 -3W9Z 10.2 DUSC_ECOLI
8 PsiBlast_PDB 75.9633%-106 - C1 -4BF9 9.7 DUSC_ECOLI
5 PsiBlast_PDB 75.5833%-108 - C1 -4YCO - DUSC_ECOLI -
88 HHSearch 75.5126% -79 - C1 -4BFA - DUSC_ECOLI -
6 PsiBlast_PDB 75.4833%-102 - C1 -4YCP 10.4 DUSC_ECOLI
23 PsiBlast_CBE 75.2633%-107 * C1 *4YCO - DUSC_ECOLI -
9 PsiBlast_PDB 68.6630% -96 - C1 -3B0P - DUSAL_THET8 -
10 PsiBlast_PDB 68.2730% -87 - C1 -3B0U - DUSAL_THET8 -
11 PsiBlast_PDB 67.6728% -89 - C1 -3B0V - DUSAL_THET8 -
7 PsiBlast_PDB 67.6030% -97 - C1 -4WFS - DUS2L_HUMAN -
96 HHSearch 63.0219% -69 - C1 -3L5L - ? -