@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu00960: (2016-06-02 )
MSQQHDYVIGKNAVIETLKSDRKLYKLWMAENTVKGQAQQVIELAKKQGITIQYVPRKKLDQMVTGQHQGVVAQVAAYEYAELDDLYKAAEEKNEQPFFLILDELEDPHNLGSIMRTADAVGAHGIVIPKRRAVGLTTTVAKASTGAIEHIPVARVTNLARTLEEMKERGIWVVGTDASAREDFRNMDGNMPLALVIGSEGKGMGRLVKEKCDFLIKLPMAGKVTSLNASVAAGLLMYEVYRKRNPVGE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACY_A_2(2I6D)
?
[Raw transfer]




GOL_D_4(1ZJR)
TRMH_AQUAE
[Raw transfer]




GOL_D_4(1ZJR)
TRMH_AQUAE
[Raw transfer]




28 HHSearch 83.2024%-109 - C1 -1IPA - ? -
49 Fugue 81.4223%-106 - C1 -1IPA - ? -
27 HHSearch 80.5325% -90 - C1 -4X3L - ? -
1 PsiBlast_PDB 77.2643% -63 - C1 -1GZ0 - RLMB_ECOLI -
3 PsiBlast_PDB 77.1734% -99 - C1 -1X7P - AVRB_STRVR -
31 HHSearch 77.0025% -96 - C1 -2I6D 3.5 ?
14 PsiBlast_PDB 76.8822%-105 - C1 -3NK7 - NSHR_STRAS -
39 HHSearch 76.7532%-100 - C1 -1ZJR 3.0 TRMH_AQUAE
5 PsiBlast_PDB 75.7734%-108 - C1 -1V2X - ? -
2 PsiBlast_PDB 75.6133% -87 - C1 -1ZJR 3.0 TRMH_AQUAE
36 HHSearch 75.0532%-108 * C1 *1V2X - ? -
22 PsiBlast_CBE 75.0434%-126 - C1 -4X3M - ? -
13 PsiBlast_PDB 75.0022%-109 - C1 -3NK6 - NSHR_STRAS -
7 PsiBlast_PDB 74.8534%-136 - C1 -4X3L - ? -
23 PsiBlast_CBE 74.4534%-141 - C1 -4X3L - ? -
21 PsiBlast_CBE 74.1734%-108 - C1 -1X7P - AVRB_STRVR -
6 PsiBlast_PDB 73.8534%-123 - C1 -4X3M - ? -
33 HHSearch 70.3723%-118 - C1 -2HA8 - TARB1_HUMAN -
26 HHSearch 69.6440% 10 - C1 -1GZ0 - RLMB_ECOLI -
8 PsiBlast_PDB 68.2031% -96 - C1 -1IPA - ? -