@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu01070: (2016-06-02 )
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTGNLSLEFIDYSLGEPKYPVEESKERDVTYSAPLRVKVRLINKETGEVKDQDVFMGDFPIMTDTGTFIINGAERVIVSQLVRSPSVYFSGKVDKNGKKGFTATVIPNRGAWLEYETDAKDVVYVRIDRTRKLPVTVLLRALGFGSDQEILDLIGENEYLRNTLDKDNTENSDKALLEIYERLRPGEPPTVENAKSLLDSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLVDPETGEILAEKGQILDRRTLDKVLPYLENGIGFRKLYPNGGVVEDEVTLQSIKIFAPTDQEGEQVINVIGNAYIEEEIKNITPADIISSISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNRFGFIETPYRRVDPETGKVTGRIDYLTADEEDNYVVAQANARLDDEGAFIDDSIVARFRGENTVVSRNRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMQPEAPFVGTGMEYVSGKDSGAAVICKHPGIVERVEAKNVWVRRYEEVDGQKVKGNLDKYSLLKFVRSNQGTCYNQRPIVSVGDEVVKGEILADGPSMELGELALGRNVMVGFMTWDGYNYEDAIIMSERLVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRNLDDRGIIRIGAEVKDGDLLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIIHDVKVFNREDGDELPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPYLPDGTPIDIMLNPLGVPSRMNIGQVLELHMGMAARYLGIHIASPVFDGAREEDVWETLEEAGMSRDAKTVLYDGRTGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGMDVKILSGDEEEIEMRDLEDEEDAKQADGLALSGDEEPEETASADVERDVVTKE

Atome Classification :

(45 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_I_9(4YLN)
RPOB_ECOLI
[Raw transfer]

-

NACID_I_9(4YLO)
RPOB_ECOLI
[Raw transfer]

-

NACID_R_18(4YLN)
RPOB_ECOLI
[Raw transfer]

-

NACID_I_9(4YLP)
RPOB_ECOLI
[Raw transfer]

-

NACID_H_13(4G7Z)
RPOB_THET8
[Raw transfer]

-

NACID_H_8(4OIO)
RPOB_THET8
[Raw transfer]

-

NACID_H_8(4Q5S)
RPOB_THET8
[Raw transfer]

-

NACID_R_18(4YLP)
RPOB_ECOLI
[Raw transfer]

-

NACID_H_8(4OIP)
RPOB_THET8
[Raw transfer]

-

NACID_H_8(4OIN)
RPOB_THET8
[Raw transfer]

-

NACID_H_8(4OIQ)
RPOB_THET8
[Raw transfer]

-

CHAIN_I_7(4MQ9)
RPOB_THET8
[Raw transfer]

-

NACID_H_8(4G7O)
RPOB_THET8
[Raw transfer]

-

NACID_H_8(4OIR)
RPOB_THET8
[Raw transfer]

-

CHAIN_H_8(4Q4Z)
RPOB_THET8
[Raw transfer]

-

NACID_H_8(4G7H)
RPOB_THET8
[Raw transfer]

-

NACID_Q_15(4XLN)
?
[Raw transfer]

-

NACID_T_18(4XLN)
?
[Raw transfer]

-

NACID_T_20(4XLR)
RPOB_THEAQ
[Raw transfer]

-

NACID_G_7(4OIQ)
RPOB_THET8
[Raw transfer]

-

NACID_G_7(5E18)
?
[Raw transfer]

-

NACID_G_1(2O5J)
RPOB_THET8
[Raw transfer]

-

CHAIN_M_13(4MEX)
RPOB_ECOLI
[Raw transfer]

-

CHAIN_N_14(4MEX)
RPOB_ECOLI
[Raw transfer]

-

NACID_Z_16(4WQS)
RPOB_THET8
[Raw transfer]

-

NACID_G_1(2O5I)
RPOB_THET8
[Raw transfer]

-

NACID_R_18(4YLO)
RPOB_ECOLI
[Raw transfer]

-

NACID_X_4(2O5I)
RPOB_THET8
[Raw transfer]

-

NACID_P_16(4S20)
RPOB_ECOLI
[Raw transfer]

-

NACID_G_7(5E17)
?
[Raw transfer]

-

NACID_Q_17(4XLR)
RPOB_THEAQ
[Raw transfer]

-

NACID_U_21(3AOI)
RPOB_THET8
[Raw transfer]

-

NACID_R_15(4G7Z)
RPOB_THET8
[Raw transfer]

-

NACID_Q_15(4G7H)
RPOB_THET8
[Raw transfer]

-

NACID_X_4(2PPB)
RPOB_THET8
[Raw transfer]

-

NACID_X_4(2O5J)
RPOB_THET8
[Raw transfer]

-

NACID_I_13(4WQS)
RPOB_THET8
[Raw transfer]

-

NACID_G_1(2PPB)
RPOB_THET8
[Raw transfer]

-

NACID_Q_17(3AOI)
RPOB_THET8
[Raw transfer]

-

NACID_Q_17(3AOH)
RPOB_THET8
[Raw transfer]

-

NACID_S_19(3AOI)
RPOB_THET8
[Raw transfer]

-

NACID_R_16(4G7H)
RPOB_THET8
[Raw transfer]

-

NACID_R_17(4G7O)
RPOB_THET8
[Raw transfer]

-

119 HHSearch 88.1058% -62 - C8 -4YFK - RPOB_ECO24 -
41 PsiBlast_CBE 81.9358% -59 - C7 -4G7H 3.6 RPOB_THET8
120 HHSearch 81.7055% -56 - C8 -2A6H - RPOB_THET8 -
30 PsiBlast_CBE 81.5158% -57 - C7 -4OIQ 3.4 RPOB_THET8
34 PsiBlast_CBE 81.4558% -57 - C7 -4MQ9 5.1 RPOB_THET8
42 PsiBlast_CBE 81.4058% -58 - C7 -4G7H 3.5 RPOB_THET8
110 Fugue 81.2954% -56 - C7 -3LU0 - RPOB_ECOLI -
24 PsiBlast_CBE 81.2758% -58 - C7 -5E17 4.3 ?
39 PsiBlast_CBE 81.2658% -54 - C7 -4G7O 3.6 RPOB_THET8
28 PsiBlast_CBE 81.0958% -58 - C7 -4Q4Z 2.7 RPOB_THET8
40 PsiBlast_CBE 81.0758% -55 - C7 -4G7O 3.9 RPOB_THET8
33 PsiBlast_CBE 80.9758% -59 - C7 -4OIN 4.0 RPOB_THET8
23 PsiBlast_CBE 80.9058% -55 - C7 -5E18 4.4 ?
31 PsiBlast_CBE 80.8958% -57 - C7 -4OIP 3.8 RPOB_THET8
29 PsiBlast_CBE 80.5858% -56 - C7 -4OIR 3.7 RPOB_THET8
32 PsiBlast_CBE 80.4258% -55 - C7 -4OIO 3.1 RPOB_THET8
38 PsiBlast_CBE 80.4158% -53 - C7 -4G7Z 3.5 RPOB_THET8
22 PsiBlast_CBE 80.2858% -56 - C7 -4XLN 2.7 ?
27 PsiBlast_CBE 80.2658% -56 - C7 -4Q5S 2.0 RPOB_THET8
2 PsiBlast_PDB 80.2258% -59 - C7 -1YNJ - RPOB_THEAQ -
5 PsiBlast_PDB 80.0958% -55 - C7 -4XLN 3.1 ?
37 PsiBlast_CBE 79.8758% -54 - C7 -4G7Z 3.6 RPOB_THET8
53 PsiBlast_CBE 78.9458% -53 - C7 -2O5J 4.2 RPOB_THET8
50 PsiBlast_CBE 78.9058% -56 - C7 -3AOH 2.5 RPOB_THET8
49 PsiBlast_CBE 78.8258% -56 - C7 -3AOI 2.3 RPOB_THET8
20 PsiBlast_PDB 78.8258% -53 - C7 -2O5I 3.9 RPOB_THET8
55 PsiBlast_CBE 78.6858% -53 - C7 -2O5I 4.1 RPOB_THET8
52 PsiBlast_CBE 78.5758% -53 - C7 -2PPB 4.8 RPOB_THET8
47 PsiBlast_CBE 78.5458% -56 - C7 -3AOI 2.3 RPOB_THET8
21 PsiBlast_CBE 78.4458% -54 - C7 -4XLR 2.2 RPOB_THEAQ
51 PsiBlast_CBE 78.3758% -52 - C7 -2PPB 3.8 RPOB_THET8
54 PsiBlast_CBE 78.3058% -53 - C7 -2O5J 3.4 RPOB_THET8
48 PsiBlast_CBE 78.1658% -56 - C7 -3AOI 2.4 RPOB_THET8
8 PsiBlast_PDB 77.7758% -54 - C7 -4XLR 2.7 RPOB_THEAQ
26 PsiBlast_CBE 77.5258% -56 - C7 -4WQS 3.5 RPOB_THET8
25 PsiBlast_CBE 77.0958% -55 - C7 -4WQS 4.2 RPOB_THET8
93 PsiBlast_CBE 63.4859% -45 - C7 -4MEX 2.0 RPOB_ECOLI
94 PsiBlast_CBE 63.1859% -44 - C7 -4MEX 2.6 RPOB_ECOLI
77 PsiBlast_CBE 62.0559% -40 - C7 -4YLN 2.6 RPOB_ECOLI
78 PsiBlast_CBE 61.6559% -46 - C7 -4YLN 1.6 RPOB_ECOLI
74 PsiBlast_CBE 61.5559% -41 - C7 -4YLO 1.5 RPOB_ECOLI
72 PsiBlast_CBE 61.5059% -48 - C7 -4YLP 2.0 RPOB_ECOLI
71 PsiBlast_CBE 61.3259% -42 - C7 -4YLP 2.7 RPOB_ECOLI
75 PsiBlast_CBE 60.3559% -47 - C7 -4YLO 2.6 RPOB_ECOLI
92 PsiBlast_CBE 58.7859% -41 - C7 -4S20 3.2 RPOB_ECOLI