@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu02100: (2016-06-03 )
MNEQIPHDKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYDTDRFQRQNALPKRVQKSLFGVNAIQGMDGSAHIHRKMLFLSLMTPPHQKRLAELMTEEWKAAVTRWEKADEVVLFEEAKEILCRVACYWAGVPLKETEVKERADDFIDMVDAFGAVGPRHWKGRRARPRAEEWIEVMIEDARAGLLKTTSGTALHEMAFHTQEDGSQLDSRMAAIELINVLRPIVAISYFLVFSALALHEHPKYKEWLRSGNSREREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAEREENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQSLHYSLARMPSLPESGFVMSGIRRKS

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HEM_A_2(3AWM)
?
[Raw transfer]




HEM_A_2(3AWQ)
?
[Raw transfer]




HEM_A_2(3VNO)
?
[Raw transfer]




HEM_A_2(3VM4)
?
[Raw transfer]




HEM_A_2(3VTJ)
?
[Raw transfer]




HEM_A_2(3AWM)
?
[Raw transfer]




HEM_A_2(3AWP)
?
[Raw transfer]




HEM_A_2(3VOO)
?
[Raw transfer]




HEM_A_2(4L40)
?
[Raw transfer]




HEM_A_2(4L54)
?
[Raw transfer]




HEM_A_2(4L54)
?
[Raw transfer]




2 PsiBlast_PDB 95.85100%-107 - C4 -2ZQX - CYPC_BACSU -
25 PsiBlast_CBE 94.96100% -99 - C4 -1IZO - CYPC_BACSU -
26 PsiBlast_CBE 94.78100%-102 - C4 -1IZO - CYPC_BACSU -
22 PsiBlast_CBE 94.67100%-102 - C4 -2ZQX - CYPC_BACSU -
89 Fugue 94.37100% -98 - C4 -1IZO - CYPC_BACSU -
3 PsiBlast_PDB 94.33100%-102 - C4 -2ZQJ - CYPC_BACSU -
21 PsiBlast_CBE 94.13100%-102 - C4 -2ZQX - CYPC_BACSU -
1 PsiBlast_PDB 94.12100% -98 * C4 *1IZO - CYPC_BACSU -
23 PsiBlast_CBE 94.09100%-102 - C4 -2ZQJ - CYPC_BACSU -
24 PsiBlast_CBE 93.71100% -98 - C4 -2ZQJ - CYPC_BACSU -
99 HHSearch 91.49100% -99 - C4 -1IZO - CYPC_BACSU -
8 PsiBlast_PDB 76.8644%-110 - C4 -3VM4 12.9 ?
6 PsiBlast_PDB 76.7644%-108 - C4 -3AWM 12.7 ?
5 PsiBlast_PDB 76.2044%-107 - C4 -3AWQ 12.9 ?
9 PsiBlast_PDB 76.1744%-109 - C4 -3VOO 12.8 ?
7 PsiBlast_PDB 75.9844%-106 - C4 -3VTJ 13.0 ?
4 PsiBlast_PDB 75.9144%-105 - C4 -3AWP 12.9 ?
10 PsiBlast_PDB 75.9044%-107 - C4 -3VNO 12.9 ?
12 PsiBlast_PDB 72.2541% -96 - C4 -4L54 11.7 ?
11 PsiBlast_PDB 72.0341% -96 - C4 -4L40 11.5 ?
101 HHSearch 71.8243%-108 - C4 -3AWM 12.7 ?
100 HHSearch 69.6741% -92 - C4 -4L54 11.1 ?