@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu02410: (2016-06-04 )
MNPIQHILDTYPLIVLDGAMATELERKGCNLNDSLWSAKILMEEPELIKQVHTDYFAAGADCAITASYQSTFEGFAARGLSEAEARRLIELSVSIAAEARDEFWSLEENRLNRPKPIIAASIGPYGAYLADGSEYRGNYAISEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLLKEFPETYAWISFSAKDGLHISDGTPAADCASWLDEHRQIAALGINCTPLQHIPSLIEELKKNTSKPIIVYPNSGEQYDPETKTWNGAACAESYGASARTWHEKGARLIGGCCRTKPENIQEIAAWARSLKTT

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HCS_A_5(1Q8J)
?
[Raw transfer]




HCS_A_6(5DMM)
MMUM_ECOLI
[Raw transfer]




HCS_A_6(5DMM)
MMUM_ECOLI
[Raw transfer]




BME_A_5(5DMM)
MMUM_ECOLI
[Raw transfer]




2 PsiBlast_PDB 76.6352%-115 - C4 -5DMM 3.2 MMUM_ECOLI
1 PsiBlast_PDB 76.2052%-114 - C4 -5DML - MMUM_ECOLI -
20 PsiBlast_CBE 75.1052%-143 - C4 -5DMN - MMUM_ECOLI -
21 HHSearch 75.0751%-116 - C4 -5DMM 3.2 MMUM_ECOLI
3 PsiBlast_PDB 74.5252%-139 - C4 -5DMN - MMUM_ECOLI -
44 Fugue 62.6630%-108 - C4 -4CCZ - METH_HUMAN -
24 HHSearch 58.8626%-105 - C4 -1Q7Z - ? -
4 PsiBlast_PDB 57.8229%-111 - C4 -4CCZ - METH_HUMAN -
22 HHSearch 57.5827%-114 - C4 -4CCZ - METH_HUMAN -
7 PsiBlast_PDB 56.7927% -96 - C4 -1Q7Z - ? -
11 PsiBlast_PDB 56.4727% -95 - C4 -1Q85 - ? -
5 PsiBlast_PDB 56.4527% -93 - C4 -1Q7M - ? -
12 PsiBlast_PDB 56.1627% -95 - C4 -1Q8A - ? -
10 PsiBlast_PDB 56.1627% -94 - C4 -3BOL - ? -
9 PsiBlast_PDB 55.8927% -92 - C4 -3BOF - ? -
8 PsiBlast_PDB 55.8427% -95 - C4 -1Q8J 2.6 ?
6 PsiBlast_PDB 54.9627% -89 - C4 -1Q7Q - ? -
14 PsiBlast_PDB 53.5222% 0 - C- -1LT7 - BHMT1_HUMAN -
43 Fugue 52.3620% -93 - C4 -1LT8 - BHMT1_HUMAN -
15 PsiBlast_PDB 49.0722% -94 - C4 -1LT8 - BHMT1_HUMAN -