@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu02650: (2016-06-04 )
MRKKVLITGFDPFDKETVNPSWEAAKRLNGFETEEAIITAEQIPTVFRSALDTLRQAIQKHQPDIVICVGQAGGRMQITPERVAINLADARIPDNEGHQPIDEEISPDGPAAYWTRLPVKRMTAKMKEHGIPAAVSYTAGTFVCNYLFYGLMDHISRTSPHIRGGFIHIPYIPQQTIDKTAPSLSLDTIVRALRIAAVTAAQYDEDVKSPGGTLH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TPT_D_8(3RO0)
PCP_BACAM
[Raw transfer]




TPT_C_7(3RO0)
PCP_BACAM
[Raw transfer]




TPT_A_5(3RO0)
PCP_BACAM
[Raw transfer]




TPT_A_5(3RO0)
PCP_BACAM
[Raw transfer]




TPT_B_6(3RO0)
PCP_BACAM
[Raw transfer]




ACY_A_4(3GIU)
PCP_STAAC
[Raw transfer]




ACY_A_4(3GIU)
PCP_STAAC
[Raw transfer]




PEG_A_5(3LAC)
PCP_BACAN
[Raw transfer]




PEG_A_5(3LAC)
PCP_BACAN
[Raw transfer]




68 Fugue 82.5472% -94 - C3 -1AUG - PCP_BACAM -
1 PsiBlast_PDB 81.5972% -92 - C3 -1AUG - PCP_BACAM -
23 PsiBlast_CBE 80.7071% -95 - C3 -3RO0 4.9 PCP_BACAM
2 PsiBlast_PDB 80.6971% -95 - C3 -3RNZ - PCP_BACAM -
47 HHSearch 80.5874%-103 - C3 -3RO0 5.1 PCP_BACAM
3 PsiBlast_PDB 80.3071% -96 - C3 -3RO0 5.1 PCP_BACAM
21 PsiBlast_CBE 80.1071% -95 - C3 -3RO0 4.8 PCP_BACAM
22 PsiBlast_CBE 79.7471% -90 - C3 -3RO0 5.3 PCP_BACAM
26 PsiBlast_CBE 74.3652%-120 - C3 -4HPS - ? -
25 PsiBlast_CBE 74.3552%-118 - C3 -4HPS - ? -
24 PsiBlast_CBE 74.2852%-120 - C3 -4HPS - ? -
4 PsiBlast_PDB 73.4652%-116 - C3 -4HPS - ? -
5 PsiBlast_PDB 73.2950%-122 - C3 -4GXH - ? -
6 PsiBlast_PDB 73.0948%-116 - C3 -3LAC 2.4 PCP_BACAN
48 HHSearch 73.0750%-116 - C3 -3LAC 2.4 PCP_BACAN
50 HHSearch 72.9152%-120 - C3 -4HPS - ? -
52 HHSearch 71.4346%-103 * C3 *3GIU 2.6 PCP_STAAC
7 PsiBlast_PDB 71.1846% -95 - C3 -3GIU 2.6 PCP_STAAC
49 HHSearch 70.5243%-110 - C3 -1X10 - PCP_PYRFU -
9 PsiBlast_PDB 69.6941%-111 - C3 -2DF5 - PCP_PYRFU -