@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu02690: (2016-06-04 )
MKKQRMLVLFTALLFVFTGCSHSPETKESPKEKAQTQKVSSASASEKKDLPNIRILATGGTIAGADQSKTSTTEYKAGVVGVESLIEAVPEMKDIANVSGEQIVNVGSTNIDNKILLKLAKRINHLLASDDVDGIVVTHGTDTLEETAYFLNLTVKSDKPVVIVGSMRPSTAISADGPSNLYNAVKVAGAPEAKGKGTLVVLNDRIASARYVTKTNTTTTDTFKSEEMGFVGTIADDIYFNNEITRKHTKDTDFSVSNLDELPQVDIIYGYQNDGSYLFDAAVKAGAKGIVFAGSGNGSLSDAAEKGADSAVKKGVTVVRSTRTGNGVVTPNQDYAEKDLLASNSLNPQKARMLLMLALTKTNDPQKIQAYFNEY

Atome Classification :

(44 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ASP_A_5(5F52)
?
[Raw transfer]




ASP_A_2(2WLT)
ASPG_HELPJ
[Raw transfer]




ASP_A_2(2WLT)
ASPG_HELPJ
[Raw transfer]




ASP_A_2(2WT4)
ASPG_HELPJ
[Raw transfer]




SIN_A_5(1HG0)
ASPG_DICCH
[Raw transfer]




ASP_H_8(3ECA)
ASPG2_ECOLI
[Raw transfer]




SIN_D_8(1HG0)
ASPG_DICCH
[Raw transfer]




SIN_C_7(1HG0)
ASPG_DICCH
[Raw transfer]




GLU_A_5(5HW0)
?
[Raw transfer]




SIN_B_6(1HG0)
ASPG_DICCH
[Raw transfer]




DAS_C_7(1HG1)
ASPG_DICCH
[Raw transfer]




DAS_B_6(1HG1)
ASPG_DICCH
[Raw transfer]




ASP_E_5(1NNS)
ASPG2_ECOLI
[Raw transfer]




GLU_A_5(1HFW)
ASPG_DICCH
[Raw transfer]




ASP_F_6(3ECA)
ASPG2_ECOLI
[Raw transfer]




ASP_E_5(1NNS)
ASPG2_ECOLI
[Raw transfer]




DDO_B_6(1JSL)
ASPG_DICCH
[Raw transfer]




ASP_G_7(3ECA)
ASPG2_ECOLI
[Raw transfer]




ASP_G_7(1NNS)
ASPG2_ECOLI
[Raw transfer]




DDO_C_7(1JSL)
ASPG_DICCH
[Raw transfer]




GLU_C_7(1HFW)
ASPG_DICCH
[Raw transfer]




DDO_A_5(1JSL)
ASPG_DICCH
[Raw transfer]




ASP_E_5(3ECA)
ASPG2_ECOLI
[Raw transfer]




ASP_E_5(3ECA)
ASPG2_ECOLI
[Raw transfer]




ASP_G_7(1HO3)
ASPG2_ECOLI
[Raw transfer]




ASP_E_5(1HO3)
ASPG2_ECOLI
[Raw transfer]




DAS_D_8(1HG1)
ASPG_DICCH
[Raw transfer]




CAB_A_7(1DJO)
ASPQ_PSES7
[Raw transfer]




CAB_B_5(1DJO)
ASPQ_PSES7
[Raw transfer]




GLU_B_6(1HFW)
ASPG_DICCH
[Raw transfer]




GOL_A_6(4RA9)
?
[Raw transfer]




DO2_B_7(1DJP)
ASPQ_PSES7
[Raw transfer]




DO2_A_5(1DJP)
ASPQ_PSES7
[Raw transfer]




38 PsiBlast_CBE 82.9659%-100 - C8 -1HFJ - ASPG_DICCH -
22 PsiBlast_CBE 82.8959% -98 - C8 -1O7J - ASPG_DICCH -
21 PsiBlast_CBE 82.8059% -97 - C8 -1O7J - ASPG_DICCH -
3 PsiBlast_PDB 82.7359% -98 - C8 -1HFJ - ASPG_DICCH -
26 PsiBlast_CBE 82.6459% -94 - C8 -1JSR - ASPG_DICCH -
29 PsiBlast_CBE 82.5159% -96 - C8 -1JSL 1.6 ASPG_DICCH
110 HHSearch 82.4159% -99 - C8 -1O7J - ASPG_DICCH -
33 PsiBlast_CBE 82.4159% -96 - C8 -1HG0 2.7 ASPG_DICCH
24 PsiBlast_CBE 82.3959% -97 - C8 -1JSR - ASPG_DICCH -
25 PsiBlast_CBE 82.3559% -97 - C8 -1JSR - ASPG_DICCH -
6 PsiBlast_PDB 82.3059% -97 - C8 -1JSR - ASPG_DICCH -
4 PsiBlast_PDB 82.2859% -97 - C8 -1HG0 3.0 ASPG_DICCH
27 PsiBlast_CBE 82.1859% -95 - C8 -1JSL - ASPG_DICCH -
35 PsiBlast_CBE 82.1559% -97 - C8 -1HG0 3.7 ASPG_DICCH
34 PsiBlast_CBE 81.9559% -98 - C8 -1HG0 2.9 ASPG_DICCH
5 PsiBlast_PDB 81.8159% -96 - C8 -1JSL 1.6 ASPG_DICCH
1 PsiBlast_PDB 81.7959% -99 - C8 -5F52 2.9 ?
23 PsiBlast_CBE 81.7659% -95 - C8 -1O7J - ASPG_DICCH -
28 PsiBlast_CBE 81.6259% -96 - C8 -1JSL 1.8 ASPG_DICCH
12 PsiBlast_PDB 81.4859% -98 - C8 -1O7J - ASPG_DICCH -
7 PsiBlast_PDB 80.4459%-111 - C8 -1HFW 3.0 ASPG_DICCH
37 PsiBlast_CBE 80.2859%-111 - C8 -1HFW 3.3 ASPG_DICCH
31 PsiBlast_CBE 79.8459%-104 - C8 -1HG1 4.1 ASPG_DICCH
2 PsiBlast_PDB 79.4259%-105 - C8 -5HW0 3.1 ?
36 PsiBlast_CBE 79.3459%-110 - C8 -1HFW 3.3 ASPG_DICCH
32 PsiBlast_CBE 78.6459%-103 - C8 -1HG1 3.0 ASPG_DICCH
30 PsiBlast_CBE 78.3259%-102 - C8 -1HG1 4.3 ASPG_DICCH
65 PsiBlast_CBE 77.8354% -87 - C8 -1NNS 3.2 ASPG2_ECOLI
103 HHSearch 77.6655% -88 - C8 -1NNS 3.0 ASPG2_ECOLI
17 PsiBlast_PDB 77.5254% -89 - C8 -1NNS 3.0 ASPG2_ECOLI
16 PsiBlast_PDB 77.3654% -87 - C8 -3ECA 2.9 ASPG2_ECOLI
62 PsiBlast_CBE 77.2054% -87 - C8 -3ECA 4.4 ASPG2_ECOLI
64 PsiBlast_CBE 76.8154% -84 - C8 -3ECA 3.3 ASPG2_ECOLI
66 PsiBlast_CBE 76.5154% -85 - C8 -1HO3 3.6 ASPG2_ECOLI
92 Fugue 76.4954% -89 - C8 -3ECA 2.9 ASPG2_ECOLI
18 PsiBlast_PDB 76.3954% -85 - C8 -1HO3 2.8 ASPG2_ECOLI
63 PsiBlast_CBE 75.6454% -84 * C8 *3ECA 3.0 ASPG2_ECOLI
104 HHSearch 75.2947% -95 - C8 -2WLT 4.4 ASPG_HELPJ
69 PsiBlast_CBE 74.9747% -95 - C8 -2WLT 4.4 ASPG_HELPJ
74 PsiBlast_CBE 74.6746% -82 - C8 -1DJO 1.9 ASPQ_PSES7
73 PsiBlast_CBE 74.3146% -83 - C8 -1DJP 2.1 ASPQ_PSES7
75 PsiBlast_CBE 74.1246% -84 - C8 -1DJO 2.1 ASPQ_PSES7
68 PsiBlast_CBE 73.7747%-102 - C8 -2WT4 4.4 ASPG_HELPJ
72 PsiBlast_CBE 73.3446% -80 - C8 -1DJP 1.1 ASPQ_PSES7