@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu02860: (2016-06-04 )
MNLVSLKDIVFGYSHTPVLDKVSLDIESGEFVGITGPNGASKSTLIKVMLGMLKPWEGTVTISKRNTEGKRLTIGYVPQQISSFNAGFPSTVLELVQSGRYTKGKWFKRLNEEDHLEVEKALKMVEMWDLRHRKIGDLSGGQKQKICIARMLASNPDLLMLDEPTTAVDYDSRKGFYEFMHHLVKNHNRTVVMVTHEQNEVQQFLDKVIRLERGEKGGWKCLTWNSCDELF

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_7(2ONJ)
Y1866_STAAM
[Raw transfer]




ANP_A_8(2ONJ)
Y1866_STAAM
[Raw transfer]




ADP_A_5(2HYD)
Y1866_STAAM
[Raw transfer]




ADP_B_6(2HYD)
Y1866_STAAM
[Raw transfer]




ADP_C_11(4HLU)
ECFA1_THEMA
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




IPA_A_6(3TIF)
Y796_METJA
[Raw transfer]




25 PsiBlast_CBE 77.0135%-114 - C1 -3TIF 3.4 Y796_METJA
5 PsiBlast_PDB 76.4234%-107 - C1 -1L2T - Y796_METJA -
6 PsiBlast_PDB 75.6735%-109 - C1 -3TIF - Y796_METJA -
24 PsiBlast_CBE 73.2634%-111 - C1 -1L2T - Y796_METJA -
66 HHSearch 66.4828%-136 - C1 -3TUI - METN_ECOLI -
1 PsiBlast_PDB 65.9031%-168 - C1 -2NQ2 - Y1470_HAEIN -
12 PsiBlast_PDB 65.5130%-120 - C1 -4YMS - ? -
15 PsiBlast_PDB 63.7630%-119 - C1 -4YMV - ? -
16 PsiBlast_PDB 63.5330%-120 - C1 -4YMW - ? -
36 PsiBlast_CBE 63.5231%-124 - C1 -2ONJ 6.3 Y1866_STAAM
37 PsiBlast_CBE 63.4031%-124 - C1 -2ONJ 6.0 Y1866_STAAM
38 PsiBlast_CBE 63.3131%-125 - C1 -2HYD 4.4 Y1866_STAAM
14 PsiBlast_PDB 62.9630%-117 - C1 -4YMU - ? -
39 PsiBlast_CBE 62.9031%-124 - C1 -2HYD 4.5 Y1866_STAAM
62 HHSearch 62.1229%-133 - C1 -3RLF - MALK_ECOLI -
55 HHSearch 62.0329%-133 * C1 *4TQU - ? -
56 HHSearch 61.7628%-126 - C1 -1Z47 - ? -
9 PsiBlast_PDB 61.2731%-141 - C1 -4G1U - HMUV_YERPE -
26 PsiBlast_CBE 61.0531%-142 - C1 -4G1U - HMUV_YERPE -
32 PsiBlast_CBE 60.5433%-124 - C1 -4U00 5.9 ?
35 PsiBlast_CBE 54.3632%-138 - C1 -4HLU 5.9 ECFA1_THEMA