@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu03150: (2016-06-05 )
MNAKRAIPVRERNIVLIGFMGVGKTTIGQLVAKKLYRDFIDIDQQIEKDFNMSIPEIFEKKGEDFFRKTEKEYILDICHHKRFKIVSLGGGSFKQEEIRNCCLENCLVLHLDLSWENWKQRADLLIESRPVLHNRSMDEMEQLFNERKVIYDKHNSKVATDNLSPEEVADYIVETLKIGWDLYQPM

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OSA_A_4(3N2E)
AROK_HELPY
[Raw transfer]




SKM_C_3(1ZUI)
AROK_HELPY
[Raw transfer]




OSA_B_7(3N2E)
AROK_HELPY
[Raw transfer]




SKM_A_2(4Y0A)
?
[Raw transfer]




SKM_A_6(1U8A)
AROK_MYCTU
[Raw transfer]




SKM_A_4(2DFN)
AROK_MYCTU
[Raw transfer]




DHK_A_6(1WE2)
AROK_MYCTU
[Raw transfer]




ADP_A_2(3MUF)
AROK_HELPY
[Raw transfer]




PEG_A_6(3VAA)
AROK_BACTN
[Raw transfer]




3 PsiBlast_PDB 82.7335%-113 - C3 -3TRF - AROK_COXBU -
21 PsiBlast_CBE 81.8235%-111 - C3 -3TRF - AROK_COXBU -
127 HHSearch 81.7234%-105 - C3 -3TRF - AROK_COXBU -
133 HHSearch 81.3938%-119 - C3 -2PT5 - AROK_AQUAE -
128 HHSearch 80.7334% -96 - C3 -1KAG - AROK_ECOLI -
1 PsiBlast_PDB 79.0438%-129 - C3 -2PT5 - AROK_AQUAE -
129 HHSearch 78.4826%-119 - C3 -3VAA 2.7 AROK_BACTN
14 PsiBlast_PDB 78.2429%-129 - C3 -1U8A 3.8 AROK_MYCTU
148 Fugue 76.6334% -95 - C3 -1KAG - AROK_ECOLI -
2 PsiBlast_PDB 76.5234% -99 - C3 -1KAG - AROK_ECOLI -
149 Fugue 75.3324%-125 - C3 -1SHK - AROL_DICCH -
13 PsiBlast_PDB 75.2329%-126 - C3 -1L4Y - AROK_MYCTU -
11 PsiBlast_PDB 75.1432%-110 - C3 -1VIA - ? -
12 PsiBlast_PDB 74.5929%-128 - C3 -1L4U - AROK_MYCTU -
132 HHSearch 73.7027%-103 - C3 -2IYV - AROK_MYCTU -
19 PsiBlast_PDB 73.3029%-119 - C3 -2DFN 3.4 AROK_MYCTU
130 HHSearch 72.9429% -93 * C3 *4Y0A - ? -
18 PsiBlast_PDB 72.7229%-122 - C3 -2G1K - AROK_MYCTU -
15 PsiBlast_PDB 72.5429%-118 - C3 -1WE2 3.6 AROK_MYCTU
150 Fugue 72.4124%-125 - C3 -3NWJ - SK2_ARATH -
4 PsiBlast_PDB 68.6732% -95 - C3 -4Y0A 4.3 ?
22 PsiBlast_CBE 67.8433%-113 - C3 -3N2E 2.9 AROK_HELPY
5 PsiBlast_PDB 65.4433%-104 - C3 -3N2E 6.6 AROK_HELPY
7 PsiBlast_PDB 64.9233%-101 - C3 -1ZUI 5.3 AROK_HELPY
9 PsiBlast_PDB 64.4733%-111 - C3 -3MUF 4.9 AROK_HELPY