@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu03320: (2016-06-05 )
MKKQRLVLAGNGMAGIRCIEEVLKLNRHMFEIVIFGSEPHPNYNRILLSSVLQGEASLDDITLNSKDWYDKHGITLYTGETVIQIDTDQQQVITDRKRTLSYDKLIVATGSSPHILPIPGADKKGVYGFRTIEDCQALMNMAQHFQKAAVIGAGLLGLEAAVGLQHLGMDVSVIHHSAGIMQKQLDQTAARLLQTELEQKGLTFLLEKDTVSISGATKADRIHFKDGSSLKADLIVMAAGVKPNIELAVSAGIKVNRGIIVNDFMQTSEPNIYAVGECAEHNGTVYGLVAPLYEQGKALASHICGVPCEEYQGSAPSAALKIAGIDVWSAGKIQEDERTTSIKIYDEQAGVYKKALFVDDKLAGVILFGDTRDKQRLLDSLLKQRDISIAKKQIIEPETSGPLFESMPSSETICQCNTVTKGAIEDAVHTNSLTTVEEVKHCTKATGSCGGCKPLVEDLLRYMTNSEYTKPASTPSFCSCTDFTEDDIIAELQRRPFTNPAEVMNQLDWKTKNGCSTCVPAIQYYLEMLYPGFVQPEPATEETCILIPQMYGGRTNAEQLRTIANIIEAYSIPDVSITHGQRLKLSGIKPADLPNMKKDLKMPVYTNEHRHALQSIKACTCGQNRSIQQLAAQIERQLEMLPLPAPISISLSCETDCTEAALQDVGAIRTQAGWDIHIGGVRGTHARSGALFCVTENEDSTAGMIKGLIQYYRETAHYLEGVHQWIDRLGIVHIREVLFEEDLRAQLLESLQTDLSLIQNPTVETGAYKKG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMT_A_4(4H4T)
?
[Raw transfer]




FMT_A_9(4H4P)
?
[Raw transfer]




47 HHSearch 82.8027%-138 - C2 -2V3A - RURE_PSEAE -
60 HHSearch 82.3021%-127 - C2 -3ICS - ? -
57 HHSearch 79.6525%-110 - C2 -3NTD - ? -
48 HHSearch 77.6328%-128 - C2 -1XHC - ? -
1 PsiBlast_PDB 76.4229%-136 - C2 -2V3A - RURE_PSEAE -
7 PsiBlast_PDB 76.0226%-128 - C2 -3KLJ - NROR_CLOAB -
45 HHSearch 75.8125%-126 - C2 -1Q1R - CAMA_PSEPU -
2 PsiBlast_PDB 75.4329%-142 - C2 -2V3B - RURE_PSEAE -
44 HHSearch 75.4225%-128 * C2 *3EF6 - TODA_PSEP1 -
54 HHSearch 74.1222%-125 - C2 -3FG2 - ? -
56 HHSearch 73.9723%-117 - C2 -4EQS - CDR_STAA3 -
43 HHSearch 73.7527%-124 - C2 -3KLJ - NROR_CLOAB -
49 HHSearch 73.1624%-115 - C2 -3LXD - ? -
5 PsiBlast_PDB 72.3930%-144 - C2 -1Q1W - CAMA_PSEPU -
61 HHSearch 72.3421%-114 - C2 -1M6I - AIFM1_HUMAN -
52 HHSearch 71.4724%-109 - C2 -4FX9 - CDR_PYRHO -
4 PsiBlast_PDB 71.0930%-145 - C2 -1Q1R - CAMA_PSEPU -
6 PsiBlast_PDB 70.4430%-144 - C2 -3LB8 - CAMA_PSEPU -
46 HHSearch 69.8724%-115 - C2 -2GQW - ? -
3 PsiBlast_PDB 69.7528%-115 - C2 -1XHC - ? -