@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu03470: (2016-06-06 )
MSRMDDKRFNCEKELTLAVIGGKWKMLILWHLGKEGTKRFNELKTLIPDITQKILVNQLRELEQDMIVHREVYPVVPPKVEYSLTPHGESLMPILEAMYEWGKGYMELIDIDKNVMKESL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_12(4A5M)
YYBR_BACSU
[Raw transfer]




BME_A_5(4A5N)
YYBR_BACSU
[Raw transfer]




EDO_E_15(4A5M)
YYBR_BACSU
[Raw transfer]




BME_D_8(4A5N)
YYBR_BACSU
[Raw transfer]




BME_A_5(4A5N)
YYBR_BACSU
[Raw transfer]




BME_B_6(4A5N)
YYBR_BACSU
[Raw transfer]




BME_C_7(4A5N)
YYBR_BACSU
[Raw transfer]




32 HHSearch 87.5153%-177 - C3 -4A5N 1.9 YYBR_BACSU
24 PsiBlast_CBE 85.7854%-174 - C3 -4A5M - YYBR_BACSU -
1 PsiBlast_PDB 85.1254%-166 - C3 -4A5M 2.4 YYBR_BACSU
23 PsiBlast_CBE 85.1054%-167 - C3 -4A5M 3.0 YYBR_BACSU
22 PsiBlast_CBE 84.1154%-167 - C3 -4A5M - YYBR_BACSU -
2 PsiBlast_PDB 84.0255%-179 - C3 -4A5N 1.9 YYBR_BACSU
21 PsiBlast_CBE 83.1554%-144 - C3 -4A5M - YYBR_BACSU -
25 PsiBlast_CBE 82.9855%-176 - C3 -4A5N 2.7 YYBR_BACSU
27 PsiBlast_CBE 81.6155%-179 - C3 -4A5N 2.7 YYBR_BACSU
26 PsiBlast_CBE 81.3855%-177 - C3 -4A5N 2.8 YYBR_BACSU
4 PsiBlast_PDB 74.8043%-149 - C3 -1Z7U - ? -
34 HHSearch 74.7439%-144 * C3 *1Z7U - ? -
3 PsiBlast_PDB 71.6153%-135 - C3 -2HZT - YTCD_BACSU -
33 HHSearch 71.4653%-136 - C3 -2HZT - YTCD_BACSU -
5 PsiBlast_PDB 70.2736%-202 - C- -2FSW - ? -
6 PsiBlast_PDB 69.8032%-158 - C3 -2F2E - ? -
30 HHSearch 68.7834%-192 - C- -2FSW - ? -
31 HHSearch 66.7434%-166 - C3 -2F2E - ? -
29 HHSearch 62.3328%-162 - C3 -4HQE - ? -
51 Fugue 62.2834% -98 - C3 -1Z7U - ? -