@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu03590: (2016-06-06 )
MLTVKGLNKSFGENEILKKIDMKIEKGKVIAILGPSGSGKTTLLRCLNALEIPNRGELAFDDFSIDFSKKVKQADILKLRRKSGMVFQAYHLFPHRTALENVMEGPVQVQKRNKEEVRKEAIQLLDKVGLKDKMDLYPFQLSGGQQQRVGIARALAIQPELMLFDEPTSALDPELVGEVLKVIKDLANEGWTMVVVTHEIKFAQEVADEVIFIDGGVIVEQGPPEQIFSAPKEERTQRFLNRILNPL

Atome Classification :

(38 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_J_5(3C41)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ADP_A_2(5DGX)

[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




ADP_D_7(4HLU)
ECFA1_THEMA
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




ADP_A_3(4YER)
?
[Raw transfer]




ATP_C_3(1VCI)
?
[Raw transfer]




22 PsiBlast_CBE 88.6059%-121 - C1 -4YMU 5.6 ?
1 PsiBlast_PDB 87.6359%-118 - C1 -4YMS - ? -
21 PsiBlast_CBE 86.5159%-117 - C1 -4YMV 5.9 ?
3 PsiBlast_PDB 85.5859%-117 - C1 -4YMU 6.1 ?
5 PsiBlast_PDB 85.3359%-117 - C1 -4YMW - ? -
4 PsiBlast_PDB 84.8859%-120 - C1 -4YMV 7.2 ?
2 PsiBlast_PDB 84.6959%-117 - C1 -4YMT - ? -
9 PsiBlast_PDB 84.5655%-127 - C1 -2OUK - ? -
7 PsiBlast_PDB 84.3155%-128 - C1 -2OLJ 5.7 ?
30 PsiBlast_CBE 83.7055%-123 - C1 -2OLK 6.0 ?
27 PsiBlast_CBE 83.1655%-122 - C1 -2OUK - ? -
8 PsiBlast_PDB 83.0955%-123 - C1 -2OLK 6.1 ?
10 PsiBlast_PDB 82.9855%-120 - C1 -2Q0H 5.3 ?
31 PsiBlast_CBE 82.8555%-119 - C1 -2OLK 5.6 ?
29 PsiBlast_CBE 82.6855%-122 - C1 -2OLK 5.5 ?
25 PsiBlast_CBE 82.5555%-125 - C1 -2Q0H 5.4 ?
23 PsiBlast_CBE 82.5255%-121 - C1 -3C41 5.6 ?
17 PsiBlast_PDB 82.3836%-141 - C1 -3TUZ - METN_ECOLI -
28 PsiBlast_CBE 81.3855%-121 - C1 -2OUK - ? -
33 PsiBlast_CBE 81.2053%-108 - C1 -4U02 - ? -
11 PsiBlast_PDB 80.9655%-120 - C1 -3C4J 6.5 ?
24 PsiBlast_CBE 80.6455%-123 - C1 -3C4J 4.5 ?
32 PsiBlast_CBE 78.6955%-117 - C1 -2OLJ 5.2 ?
6 PsiBlast_PDB 78.4955%-113 - C1 -3C41 5.4 ?
12 PsiBlast_PDB 77.9653%-111 - C1 -4U00 6.3 ?
128 HHSearch 76.4155%-109 - C1 -4U00 6.3 ?
14 PsiBlast_PDB 75.9349%-115 - C1 -1B0U 6.3 HISP_SALTY
58 PsiBlast_CBE 59.2539%-113 - C1 -3TIF 6.1 Y796_METJA
90 PsiBlast_CBE 59.1736%-118 - C1 -3FVQ 7.3 FBPC_NEIG1
91 PsiBlast_CBE 59.1536%-116 - C1 -3FVQ 7.1 FBPC_NEIG1
57 PsiBlast_CBE 59.0639%-116 - C1 -3TIF 6.2 Y796_METJA
119 HHSearch 58.6632%-122 - C1 -4YER 5.9 ?
56 PsiBlast_CBE 58.5639%-110 - C1 -1L2T 6.4 Y796_METJA
117 HHSearch 58.3934%-115 - C1 -3FVQ 7.1 FBPC_NEIG1
55 PsiBlast_CBE 57.7739%-115 - C1 -1L2T 6.6 Y796_METJA
59 PsiBlast_CBE 57.5832%-117 - C1 -1VCI 4.7 ?
111 PsiBlast_CBE 55.3432%-146 - C1 -4HLU 5.3 ECFA1_THEMA
96 PsiBlast_CBE 37.5031%-117 - C1 -5DGX 6.5