@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu03670: (2016-06-06 )
MASIDNESIIKSVPQKGFFGHPRGLFTLFFTEFWERFSYYGMRAILLYYLYTETVNGGLGFDKGTAVAIMSIYGSLVYMSTIIGGWLADRVFGTANTVFYGGIFIMFGHIALAYPGSSIAFYISMVLIIVGTGLLKPNVSSVVGDLYTKEDPRRDSGFSIFYMGINLGGLLAPLIVGTLGQKYNYHLGFGAAAVGMLLGLIVFALTRKKNLGLAGSNVPNPLSKKSAIGTGIGVIIVAIAVIISVQTGVLTIKRFIDLVSILGILIPVIYFIIMFTSKKADKTEKSRLAAYVPLFIGAVMFWAIQEQGATILAVYADERIRLSLGGFELQSSWFQSLNPLFVVIFAPIFAWLWMKLGKRQPSTPVKFSIGIILAGLSFIIMVFPAMQGKEALVSPLWLVLSFLLVVLGELCLSPVGLSVTTKLAPAAFSAQTMSMWFLTNAAAQAINAQVAGLFDKIPETMYFGTIGLISIVLGGILLLLSPVIKRAMKGVL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

78M_A_7(4D2C)
?
[Raw transfer]



78M_A_7(4D2B)
?
[Raw transfer]



OLA_A_15(4IKW)
?
[Raw transfer]



OLA_A_15(4IKW)
?
[Raw transfer]



OLA_A_10(4IKV)
?
[Raw transfer]



OLA_A_13(4IKY)
?
[Raw transfer]



78M_A_4(4XNI)
?
[Raw transfer]



OLA_A_11(4IKV)
?
[Raw transfer]



OLA_A_9(4IKV)
?
[Raw transfer]



78N_A_8(4D2B)
?
[Raw transfer]
22 Fugue 91.1665%-153 - C2 -4IKW 3.2 ?
5 PsiBlast_PDB 90.7764%-151 - C2 -4IKZ - ? -
1 PsiBlast_PDB 90.5165%-153 - C2 -4IKV 3.5 ?
3 PsiBlast_PDB 88.6864%-149 - C2 -4IKX - ? -
32 HHSearch 84.7965%-158 - C2 -4IKV 2.5 ?
4 PsiBlast_PDB 82.5764%-153 - C2 -4IKY 3.5 ?
2 PsiBlast_PDB 81.8665%-153 - C2 -4IKW 3.8 ?
9 PsiBlast_PDB 80.7050%-162 - C2 -4XNI 2.4 ?
7 PsiBlast_PDB 80.6650%-163 - C2 -4D2B 2.2 ?
8 PsiBlast_PDB 80.5750%-166 - C2 -4D2C 2.1 ?
21 PsiBlast_CBE 79.9350%-162 - C2 -4APS - ? -
6 PsiBlast_PDB 79.6650%-163 - C2 -4APS - ? -
10 PsiBlast_PDB 76.9038%-170 - C2 -4W6V - ? -
35 HHSearch 70.4434%-163 - C2 -4W6V - ? -
12 PsiBlast_PDB 69.2628%-171 - C2 -4LEP - ? -
14 PsiBlast_PDB 66.0327%-160 - C2 -4UVM - ? -
11 PsiBlast_PDB 64.2530%-183 - C2 -4Q65 - DTPD_ECOLI -
48 HHSearch 63.9524%-161 - C2 -4UVM - ? -
13 PsiBlast_PDB 58.6427%-152 - C2 -2XUT - ? -
23 Fugue 56.9423%-141 - C2 -2XUT - ? -