@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu03930: (2016-06-06 )
MYPDLKGKVVAITGAASGLGKAMAIRFGKEQAKVVINYYSNKQDPNEVKEEVIKAGGEAVVVQGDVTKEEDVKNIVQTAIKEFGTLDIMINNAGLENPVPSHEMPLKDWDKVIGTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEVIPWPLFVHYAASKGGIKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPKQKADVESMIPMGYIGEPEEIAAVAAWLASKEASYVTGITLFADGGMTQYPSFQAGRG

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_K_11(1GEE)
DHG_BACME
[Raw transfer]



NAD_I_9(1GEE)
DHG_BACME
[Raw transfer]



NAD_O_15(1GCO)
DHG_BACME
[Raw transfer]



NAD_J_10(1GEE)
DHG_BACME
[Raw transfer]



NAD_L_12(1GEE)
DHG_BACME
[Raw transfer]



NAD_I_9(1GEE)
DHG_BACME
[Raw transfer]



NAD_I_9(1RWB)
DHG_BACME
[Raw transfer]



NAD_M_13(1GCO)
DHG_BACME
[Raw transfer]



NAI_B_3(3AUT)
DHG4_BACME
[Raw transfer]



NAD_I_9(1GCO)
DHG_BACME
[Raw transfer]



NAI_D_14(3AY6)
DHG4_BACME
[Raw transfer]



NAD_J_10(1G6K)
DHG_BACME
[Raw transfer]



NAD_L_12(1G6K)
DHG_BACME
[Raw transfer]



NAI_A_5(3AY6)
DHG4_BACME
[Raw transfer]



NAI_B_9(3AY6)
DHG4_BACME
[Raw transfer]



NAD_K_11(1GCO)
DHG_BACME
[Raw transfer]



NAD_K_11(1G6K)
DHG_BACME
[Raw transfer]



NAD_O_15(1RWB)
DHG_BACME
[Raw transfer]



NAI_C_11(3AY6)
DHG4_BACME
[Raw transfer]



NAD_I_9(1G6K)
DHG_BACME
[Raw transfer]



NAD_K_11(1RWB)
DHG_BACME
[Raw transfer]



NAD_M_13(1RWB)
DHG_BACME
[Raw transfer]



GOL_A_3(3GED)
?
[Raw transfer]



BGC_B_8(3AY6)
DHG4_BACME
[Raw transfer]



BGC_C_12(3AY6)
DHG4_BACME
[Raw transfer]



BGC_A_3(3AUU)
DHG4_BACME
[Raw transfer]



BGC_B_4(3AUU)
DHG4_BACME
[Raw transfer]
31 PsiBlast_CBE 82.8283% -65 - C1 -1G6K 9.6 DHG_BACME
30 PsiBlast_CBE 82.4383% -65 - C1 -1G6K 9.7 DHG_BACME
7 PsiBlast_PDB 82.3383% -62 - C1 -1G6K 9.5 DHG_BACME
32 PsiBlast_CBE 82.1683% -62 - C1 -1G6K 9.7 DHG_BACME
34 PsiBlast_CBE 81.9283% -62 - C1 -1GEE 10.8 DHG_BACME
35 PsiBlast_CBE 81.8483% -61 - C1 -1GEE 10.7 DHG_BACME
27 PsiBlast_CBE 81.8083% -61 - C1 -1GCO 10.6 DHG_BACME
8 PsiBlast_PDB 81.8083% -61 - C1 -1GEE 10.7 DHG_BACME
126 HHSearch 81.7483% -60 - C1 -1GEE 10.2 DHG_BACME
4 PsiBlast_PDB 81.2382% -62 - C1 -3AY7 - DHG4_BACME -
29 PsiBlast_CBE 81.2283% -59 - C1 -1GCO 10.6 DHG_BACME
6 PsiBlast_PDB 81.2283% -60 - C1 -1GCO 10.3 DHG_BACME
33 PsiBlast_CBE 81.2083% -62 - C1 -1GEE 10.6 DHG_BACME
9 PsiBlast_PDB 81.1182% -62 - C1 -1RWB 10.0 DHG_BACME
22 PsiBlast_CBE 80.9882% -63 - C1 -3AUT 10.2 DHG4_BACME
37 PsiBlast_CBE 80.9782% -63 - C1 -1RWB 10.0 DHG_BACME
2 PsiBlast_PDB 80.9482% -63 - C1 -3AUT - DHG4_BACME -
28 PsiBlast_CBE 80.7683% -61 - C1 -1GCO 10.7 DHG_BACME
23 PsiBlast_CBE 80.5382% -62 - C1 -3AY7 - DHG4_BACME -
38 PsiBlast_CBE 80.2382% -59 - C1 -1RWB 10.4 DHG_BACME
36 PsiBlast_CBE 80.1182% -62 - C1 -1RWB 10.3 DHG_BACME
25 PsiBlast_CBE 80.0982% -64 - C1 -3AY6 10.7 DHG4_BACME
5 PsiBlast_PDB 79.9482% -64 - C1 -3AY6 11.3 DHG4_BACME
3 PsiBlast_PDB 79.4082% -61 - C1 -3AUU 3.2 DHG4_BACME
26 PsiBlast_CBE 78.9782% -60 - C1 -3AY6 11.2 DHG4_BACME
21 PsiBlast_CBE 78.9182% -61 - C1 -3AUU 3.5 DHG4_BACME
24 PsiBlast_CBE 77.6882% -58 - C1 -3AY6 11.1 DHG4_BACME