@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu04150: (2016-06-07 )
MQRIQLAEDLQFSRVIHGLWRLNEWNYSDAELLSLIEWCIDHGITTFDHADIYGGYTCEKLFGNALALSPGLRENIELVTKCGIVLESPERPAHRSHHYNTSKSHILASVEQSLMNLRTDYIDMLLIHRPDPLMDPEGVAEAFQALKCSGKVRYFGVSNFKDHQYRMLESYLPEKLVTNQIELSAYELENMLDGTLNLCQEKRIPPMAWSPLAGGKVFTENTDKDRRVRTALESVQGEIGAASLDEVMYAWLYTHPAGIMPIVGSGKRERISAAINALSYKLDQDQWFRIFTAVQGYDIP

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_A_4(1OG6)
YDHF_ECOLI
[Raw transfer]




NAP_B_5(1OG6)
YDHF_ECOLI
[Raw transfer]




NAP_C_6(1OG6)
YDHF_ECOLI
[Raw transfer]




GOL_A_6(3O0K)
?
[Raw transfer]




EDO_A_5(3O0K)
?
[Raw transfer]




GOL_D_12(3O0K)
?
[Raw transfer]




1 PsiBlast_PDB 95.1951%-133 - C- -4R9O - ? -
2 PsiBlast_PDB 94.8450%-123 - C6 -1OG6 12.3 YDHF_ECOLI
21 PsiBlast_CBE 94.3750%-120 - C6 -1OG6 12.0 YDHF_ECOLI
3 PsiBlast_PDB 94.3449%-121 - C6 -1UR3 - YDHF_ECOLI -
27 HHSearch 94.1252%-133 - C- -4R9O - ? -
22 PsiBlast_CBE 92.6850%-122 - C6 -1OG6 8.7 YDHF_ECOLI
6 PsiBlast_PDB 74.8025%-135 - C6 -3UYI - PERR_RAUSE -
34 HHSearch 69.1226%-108 - C6 -1PZ1 - GS69_BACSU -
33 HHSearch 67.9725%-111 - C6 -1PYF - IOLS_BACSU -
29 HHSearch 67.7622%-106 - C6 -1LQA - TAS_ECOLI -
32 HHSearch 67.3322%-108 - C6 -3LUT - KCAB2_RAT -
50 Fugue 66.9821%-106 - C6 -1QRQ - KCAB2_RAT -
28 HHSearch 66.7522%-111 - C6 -3EAU - KCAB2_RAT -
31 HHSearch 65.5622%-109 - C6 -3N6Q - GPR_ECOLI -
41 HHSearch 65.2824%-117 - C6 -4WGH - ? -
30 HHSearch 65.0823%-131 - C6 -1YNP - ? -
46 HHSearch 65.0727% -98 - C6 -3O0K 3.1 ?
12 PsiBlast_PDB 64.9726%-120 - C6 -4WGH - ? -
36 HHSearch 64.4023%-104 - C6 -3N2T - ? -
48 HHSearch 62.3321%-111 - C6 -4HBK - ? -