@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu04340: (2016-06-07 )
MAHKTAGQAMTELLEQWGVDHVYGIPGDSINEFIEELRHERNQLKFIQTRHEEVAALAAAAEAKLTGKIGVCLSIAGPGAVHLLNGLYDAKADGAPVLAIAGQVSSGEVGRDYFQEIKLEQMFEDVAVFNREVHSAESLPDLLNQAIRTAYSKKGVAVLSVSDDLFAEKIKREPVYTSPVYIEGNLEPKKEQLVTCAQYINNAKKPIILAGQGMKKAKRELLEFADKAAAPIVVTLPAKGVVPDKHPHFLGNLGQIGTKPAYEAMEECDLLIMLGTSFPYRDYLPDDTPAIQLDSDPAKIGKRYPVTAGLVCDSALGLRELTEYIERKEDRRFLNACTEHMQHWWNEIEKDETEATTPLKPQQVVARLQEAAADDAVLSVDVGTVTVWMARHFKMNANQDFIVSSWLATMGCGLPGAIAASLSEPERQAIAVCGDGGFSMVMQDLPTAVKYKLPITVVILNNENLGMIEYEQQVKGNIDYVTKLQNVDYAAFAESCGAKGIKVTKAEELAPAFHEALHSDQPVVVDVMIGNEPPLPGKITYGQAKGFSKYMLKNFFENQKFEMPSLKKSLKRLF

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TPP_B_7(1POW)
POXB_LACPL
[Raw transfer]



TDP_B_7(3EY9)
POXB_ECOLI
[Raw transfer]



TDP_A_3(3EY9)
POXB_ECOLI
[Raw transfer]



TPP_B_9(1POX)
POXB_LACPL
[Raw transfer]



P23_A_12(1T9A)
ILVB_YEAST
[Raw transfer]



GOL_A_8(4FEG)
?
[Raw transfer]



GOL_A_11(1POX)
POXB_LACPL
[Raw transfer]



GOL_A_11(1POX)
POXB_LACPL
[Raw transfer]



GOL_B_12(1POX)
POXB_LACPL
[Raw transfer]
12 PsiBlast_PDB 91.7737%-110 - C7 -3EY9 6.6 POXB_ECOLI
34 PsiBlast_CBE 91.6337%-110 - C7 -3EY9 6.5 POXB_ECOLI
58 HHSearch 91.6037%-118 - C7 -3EYA - POXB_ECOLI -
1 PsiBlast_PDB 90.2337% -97 - C7 -1POW - POXB_LACPL -
13 PsiBlast_PDB 89.9237%-117 - C7 -3EYA - POXB_ECOLI -
43 PsiBlast_CBE 89.8237%-118 - C7 -3EYA - POXB_ECOLI -
21 PsiBlast_CBE 89.5637% -97 - C7 -1POW 5.5 POXB_LACPL
6 PsiBlast_PDB 89.4037% -96 - C7 -2EZ4 - POXB_LACPL -
67 HHSearch 89.0238% -99 * C7 *4KGD - ? -
7 PsiBlast_PDB 88.7237% -96 - C7 -2EZ8 - POXB_LACPL -
45 PsiBlast_CBE 88.7137%-117 - C7 -3EYA - POXB_ECOLI -
9 PsiBlast_PDB 88.6337% -95 - C7 -2EZT - POXB_LACPL -
35 PsiBlast_CBE 88.4937%-118 - C7 -3EYA - POXB_ECOLI -
22 PsiBlast_CBE 88.4937% -96 - C7 -1POX 5.7 POXB_LACPL
30 PsiBlast_CBE 88.4737% -96 - C7 -2EZ4 - POXB_LACPL -
2 PsiBlast_PDB 88.4637% -94 - C7 -1POX 2.8 POXB_LACPL
5 PsiBlast_PDB 88.4437% -97 - C7 -4KGD - ? -
26 PsiBlast_CBE 88.3837% -97 - C7 -2EZU - POXB_LACPL -
3 PsiBlast_PDB 88.3637% -97 - C7 -4FEE - ? -
33 PsiBlast_CBE 88.2337% -97 - C7 -1Y9D - POXB_LACPL -
24 PsiBlast_CBE 87.3037% -96 - C7 -4FEG 2.9 ?
46 Fugue 87.0036% -98 - C7 -1POX 2.8 POXB_LACPL